Gene : PhHAL.9G250100 P. hallii HAL v2.1

Defline:  (1 of 1) 2.1.1.198 - 16S rRNA (cytidine(1402)-2'-O)-methyltransferase Genomic Order:  2388
Name:  ? PhHAL.9G250100 Secondary Identifier:  ? PAC:40394424

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PhHAL.9G250100 0.5kb upstream 0.5kb upstream 5199 true Chr09: 17450073-17455271 Panicum hallii HAL
PhHAL.9G250100 0.5kb upstream 0.5kb upstream 500 false Chr09: 17450073-17450572 Panicum hallii HAL
PhHAL.9G250100 0.5kb downstream 0.5kb downstream 5199 true Chr09: 17450573-17455771 Panicum hallii HAL
PhHAL.9G250100 0.5kb downstream 0.5kb downstream 500 false Chr09: 17455272-17455771 Panicum hallii HAL
PhHAL.9G250100 1.0kb upstream 1.0kb upstream 5699 true Chr09: 17449573-17455271 Panicum hallii HAL
PhHAL.9G250100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 17449573-17450572 Panicum hallii HAL
PhHAL.9G250100 1.0kb downstream 1.0kb downstream 5699 true Chr09: 17450573-17456271 Panicum hallii HAL
PhHAL.9G250100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 17455272-17456271 Panicum hallii HAL
PhHAL.9G250100 2.0kb upstream 2.0kb upstream 6699 true Chr09: 17448573-17455271 Panicum hallii HAL
PhHAL.9G250100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 17448573-17450572 Panicum hallii HAL
PhHAL.9G250100 2.0kb downstream 2.0kb downstream 6699 true Chr09: 17450573-17457271 Panicum hallii HAL
PhHAL.9G250100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 17455272-17457271 Panicum hallii HAL
PhHAL.9G250100 5.0kb upstream 5.0kb upstream 9699 true Chr09: 17445573-17455271 Panicum hallii HAL
PhHAL.9G250100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 17445573-17450572 Panicum hallii HAL
PhHAL.9G250100 5.0kb downstream 5.0kb downstream 9699 true Chr09: 17450573-17460271 Panicum hallii HAL
PhHAL.9G250100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 17455272-17460271 Panicum hallii HAL
PhHAL.9G250100 10.0kb upstream 10.0kb upstream 14699 true Chr09: 17440573-17455271 Panicum hallii HAL
PhHAL.9G250100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 17440573-17450572 Panicum hallii HAL
PhHAL.9G250100 10.0kb downstream 10.0kb downstream 14699 true Chr09: 17450573-17465271 Panicum hallii HAL
PhHAL.9G250100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 17455272-17465271 Panicum hallii HAL

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183912 5267 Panicoideae View MSA
124569923 5269 Grass View MSA
122043278 5273 Angiosperm View MSA
121347213 5274 Embryophyte View MSA
123424563 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier