Gene : Glyma.07G214500 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10322:SF21 - DNA POLYMERASE ALPHA CATALYTIC SUBUNIT Genomic Order:  2145
Name:  ? Glyma.07G214500 Secondary Identifier:  ? PAC:30493332
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G214500 0.5kb upstream 0.5kb upstream 3955 true Chr07: 38652797-38656751 Glycine max
Glyma.07G214500 0.5kb upstream 0.5kb upstream 500 false Chr07: 38652797-38653296 Glycine max
Glyma.07G214500 0.5kb downstream 0.5kb downstream 3955 true Chr07: 38653297-38657251 Glycine max
Glyma.07G214500 0.5kb downstream 0.5kb downstream 500 false Chr07: 38656752-38657251 Glycine max
Glyma.07G214500 1.0kb upstream 1.0kb upstream 4455 true Chr07: 38652297-38656751 Glycine max
Glyma.07G214500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 38652297-38653296 Glycine max
Glyma.07G214500 1.0kb downstream 1.0kb downstream 4455 true Chr07: 38653297-38657751 Glycine max
Glyma.07G214500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 38656752-38657751 Glycine max
Glyma.07G214500 2.0kb upstream 2.0kb upstream 5455 true Chr07: 38651297-38656751 Glycine max
Glyma.07G214500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 38651297-38653296 Glycine max
Glyma.07G214500 2.0kb downstream 2.0kb downstream 5455 true Chr07: 38653297-38658751 Glycine max
Glyma.07G214500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 38656752-38658751 Glycine max
Glyma.07G214500 5.0kb upstream 5.0kb upstream 8455 true Chr07: 38648297-38656751 Glycine max
Glyma.07G214500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 38648297-38653296 Glycine max
Glyma.07G214500 5.0kb downstream 5.0kb downstream 8455 true Chr07: 38653297-38661751 Glycine max
Glyma.07G214500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 38656752-38661751 Glycine max
Glyma.07G214500 10.0kb upstream 10.0kb upstream 13455 true Chr07: 38643297-38656751 Glycine max
Glyma.07G214500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 38643297-38653296 Glycine max
Glyma.07G214500 10.0kb downstream 10.0kb downstream 13455 true Chr07: 38653297-38666751 Glycine max
Glyma.07G214500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 38656752-38666751 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121607302 5273 Angiosperm Singleton cluster - no MSA
122238577 5265 Fabidae Singleton cluster - no MSA
123983973 5270 Rosid Singleton cluster - no MSA
123559524 5271 Pentapetalae Singleton cluster - no MSA
122594330 5272 Eudicot Singleton cluster - no MSA
120879583 5274 Embryophyte Singleton cluster - no MSA
122920458 5275 Viridiplantae Singleton cluster - no MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.017     Low  
cufflinks 0.005     Low Low
cufflinks 0.019     Low  
cufflinks 0.044     Low  
cufflinks 0.041     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.067     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.024     Low  
cufflinks 0.077     Low High
cufflinks 0.032     Low  
cufflinks 0.006     Low Low
cufflinks 0.029     Low  
cufflinks 0.062     Low High
cufflinks 0.022     Low  
cufflinks 0.032     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain