Gene : Glyma.07G217200 G. max Wm82.a2.v1
Defline:  (1 of 788) PF13041 - PPR repeat family (PPR_2) Genomic Order:  2172
Name:  ? Glyma.07G217200 Secondary Identifier:  ? PAC:30494049
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G217200 0.5kb upstream 0.5kb upstream 2171 true Chr07: 38985717-38987887 Glycine max
Glyma.07G217200 0.5kb upstream 0.5kb upstream 500 false Chr07: 38987388-38987887 Glycine max
Glyma.07G217200 0.5kb downstream 0.5kb downstream 2171 true Chr07: 38985217-38987387 Glycine max
Glyma.07G217200 0.5kb downstream 0.5kb downstream 500 false Chr07: 38985217-38985716 Glycine max
Glyma.07G217200 1.0kb upstream 1.0kb upstream 2671 true Chr07: 38985717-38988387 Glycine max
Glyma.07G217200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 38987388-38988387 Glycine max
Glyma.07G217200 1.0kb downstream 1.0kb downstream 2671 true Chr07: 38984717-38987387 Glycine max
Glyma.07G217200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 38984717-38985716 Glycine max
Glyma.07G217200 2.0kb upstream 2.0kb upstream 3671 true Chr07: 38985717-38989387 Glycine max
Glyma.07G217200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 38987388-38989387 Glycine max
Glyma.07G217200 2.0kb downstream 2.0kb downstream 3671 true Chr07: 38983717-38987387 Glycine max
Glyma.07G217200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 38983717-38985716 Glycine max
Glyma.07G217200 5.0kb upstream 5.0kb upstream 6671 true Chr07: 38985717-38992387 Glycine max
Glyma.07G217200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 38987388-38992387 Glycine max
Glyma.07G217200 5.0kb downstream 5.0kb downstream 6671 true Chr07: 38980717-38987387 Glycine max
Glyma.07G217200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 38980717-38985716 Glycine max
Glyma.07G217200 10.0kb upstream 10.0kb upstream 11671 true Chr07: 38985717-38997387 Glycine max
Glyma.07G217200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 38987388-38997387 Glycine max
Glyma.07G217200 10.0kb downstream 10.0kb downstream 11671 true Chr07: 38975717-38987387 Glycine max
Glyma.07G217200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 38975717-38985716 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306783 5265 Fabidae View MSA
124063635 5270 Rosid View MSA
123750862 5271 Pentapetalae View MSA
122792992 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.774337 0.0 2.82188   High
cufflinks 0.614279 0.0 2.26485    
cufflinks 0.444951 0.0 1.6645    
cufflinks 0.398619 0.0 1.50153    
cufflinks 0.546436 0.0 2.03055    
cufflinks 0.336739 0.0 1.27813   Low
cufflinks 0.567824 0.0 2.10454    
cufflinks 0.285945 0.0 1.09265   Low
cufflinks 0.627871 0.0 2.31246    
cufflinks 0.335        
cufflinks 0.045     Low Low
cufflinks 0.64        
cufflinks 0.762       High
cufflinks 0.88       High
cufflinks 0.056       Low
cufflinks 0.366        
cufflinks 0.242        
cufflinks 0.637        
cufflinks 0.466        
cufflinks 0.278        
cufflinks 0.172        
cufflinks 0.366        
cufflinks 0.378        
cufflinks 0.102       Low
cufflinks 0.372        
cufflinks 0.1       Low

0 Strain