Gene : Glyma.07G217500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10882 - DIPHTHINE SYNTHASE Genomic Order:  2175
Name:  ? Glyma.07G217500 Secondary Identifier:  ? PAC:30492661
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G217500 0.5kb upstream 0.5kb upstream 3540 true Chr07: 39001928-39005467 Glycine max
Glyma.07G217500 0.5kb upstream 0.5kb upstream 500 false Chr07: 39004968-39005467 Glycine max
Glyma.07G217500 0.5kb downstream 0.5kb downstream 3540 true Chr07: 39001428-39004967 Glycine max
Glyma.07G217500 0.5kb downstream 0.5kb downstream 500 false Chr07: 39001428-39001927 Glycine max
Glyma.07G217500 1.0kb upstream 1.0kb upstream 4040 true Chr07: 39001928-39005967 Glycine max
Glyma.07G217500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 39004968-39005967 Glycine max
Glyma.07G217500 1.0kb downstream 1.0kb downstream 4040 true Chr07: 39000928-39004967 Glycine max
Glyma.07G217500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 39000928-39001927 Glycine max
Glyma.07G217500 2.0kb upstream 2.0kb upstream 5040 true Chr07: 39001928-39006967 Glycine max
Glyma.07G217500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 39004968-39006967 Glycine max
Glyma.07G217500 2.0kb downstream 2.0kb downstream 5040 true Chr07: 38999928-39004967 Glycine max
Glyma.07G217500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 38999928-39001927 Glycine max
Glyma.07G217500 5.0kb upstream 5.0kb upstream 8040 true Chr07: 39001928-39009967 Glycine max
Glyma.07G217500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 39004968-39009967 Glycine max
Glyma.07G217500 5.0kb downstream 5.0kb downstream 8040 true Chr07: 38996928-39004967 Glycine max
Glyma.07G217500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 38996928-39001927 Glycine max
Glyma.07G217500 10.0kb upstream 10.0kb upstream 13040 true Chr07: 39001928-39014967 Glycine max
Glyma.07G217500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 39004968-39014967 Glycine max
Glyma.07G217500 10.0kb downstream 10.0kb downstream 13040 true Chr07: 38991928-39004967 Glycine max
Glyma.07G217500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 38991928-39001927 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304341 5265 Fabidae View MSA
124063616 5270 Rosid View MSA
123740790 5271 Pentapetalae View MSA
122786198 5272 Eudicot View MSA
122041685 5273 Angiosperm View MSA
121345013 5274 Embryophyte View MSA
123423829 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.0425 0.0 9.85344   Low
cufflinks 4.98692 0.0 15.0499    
cufflinks 2.62668 0.0 8.64126   Low
cufflinks 4.00173 0.0 12.4292    
cufflinks 5.90767 0.0 17.435   High
cufflinks 3.60247 0.0 11.3883    
cufflinks 5.12247 0.0 15.4259    
cufflinks 5.3572 0.0 15.9665    
cufflinks 4.52409 0.0 13.8324    
cufflinks 1.679        
cufflinks 0.38       Low
cufflinks 1.735        
cufflinks 3.335       High
cufflinks 4.355       High
cufflinks 0.564       Low
cufflinks 1.256        
cufflinks 0.988        
cufflinks 2.172        
cufflinks 2.393        
cufflinks 1.228        
cufflinks 0.462       Low
cufflinks 1.546        
cufflinks 1.793        
cufflinks 0.323       Low
cufflinks 1.339        
cufflinks 0.761        

0 Strain