Gene : Glyma.07G258200 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR24322:SF566 - GLUCOSE AND RIBITOL DEHYDROGENASE HOMOLOG 1-RELATED Genomic Order:  2582
Name:  ? Glyma.07G258200 Secondary Identifier:  ? PAC:30493367
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G258200 0.5kb upstream 0.5kb upstream 1940 true Chr07: 43411050-43412989 Glycine max
Glyma.07G258200 0.5kb upstream 0.5kb upstream 500 false Chr07: 43411050-43411549 Glycine max
Glyma.07G258200 0.5kb downstream 0.5kb downstream 1940 true Chr07: 43411550-43413489 Glycine max
Glyma.07G258200 0.5kb downstream 0.5kb downstream 500 false Chr07: 43412990-43413489 Glycine max
Glyma.07G258200 1.0kb upstream 1.0kb upstream 2440 true Chr07: 43410550-43412989 Glycine max
Glyma.07G258200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 43410550-43411549 Glycine max
Glyma.07G258200 1.0kb downstream 1.0kb downstream 2440 true Chr07: 43411550-43413989 Glycine max
Glyma.07G258200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 43412990-43413989 Glycine max
Glyma.07G258200 2.0kb upstream 2.0kb upstream 3440 true Chr07: 43409550-43412989 Glycine max
Glyma.07G258200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 43409550-43411549 Glycine max
Glyma.07G258200 2.0kb downstream 2.0kb downstream 3440 true Chr07: 43411550-43414989 Glycine max
Glyma.07G258200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 43412990-43414989 Glycine max
Glyma.07G258200 5.0kb upstream 5.0kb upstream 6440 true Chr07: 43406550-43412989 Glycine max
Glyma.07G258200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 43406550-43411549 Glycine max
Glyma.07G258200 5.0kb downstream 5.0kb downstream 6440 true Chr07: 43411550-43417989 Glycine max
Glyma.07G258200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 43412990-43417989 Glycine max
Glyma.07G258200 10.0kb upstream 10.0kb upstream 11440 true Chr07: 43401550-43412989 Glycine max
Glyma.07G258200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 43401550-43411549 Glycine max
Glyma.07G258200 10.0kb downstream 10.0kb downstream 11440 true Chr07: 43411550-43422989 Glycine max
Glyma.07G258200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 43412990-43422989 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296731 5265 Fabidae View MSA
124062635 5270 Rosid View MSA
123753766 5271 Pentapetalae View MSA
122796272 5272 Eudicot View MSA
122051522 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121351668 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.100005 0.0 0.401532 Low  
cufflinks 0.0167826 0.0 0.088836 Low  
cufflinks 0.0213246 0.0 0.104426 Low  
cufflinks 0.0548895 0.0 0.230319 Low  
cufflinks 0.0425797 0.0 0.182815 Low  
cufflinks 1.54685 0.0 6.66249    
cufflinks 140.042 0.0 464.072 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.101181 0.0 0.406554 Low  
cufflinks 0.056     Low  
cufflinks 0.034     Low  
cufflinks 0.011     Low Low
cufflinks 0.129       High
cufflinks 0.205       High
cufflinks 0.006     Low Low
cufflinks 0.051     Low  
cufflinks 0.065     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low Low
cufflinks 0.024     Low  
cufflinks 0.034     Low  
cufflinks 0.054     Low  
cufflinks 0.025     Low  
cufflinks 0.046     Low  
cufflinks 0.025     Low  
cufflinks 0.114       High

0 Strain