Gene : Glyma.07G259600 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR34682:SF2 - DNA BINDING PROTEIN Genomic Order:  2596
Name:  ? Glyma.07G259600 Secondary Identifier:  ? PAC:30492296
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G259600 0.5kb upstream 0.5kb upstream 1793 true Chr07: 43513609-43515401 Glycine max
Glyma.07G259600 0.5kb upstream 0.5kb upstream 500 false Chr07: 43514902-43515401 Glycine max
Glyma.07G259600 0.5kb downstream 0.5kb downstream 1793 true Chr07: 43513109-43514901 Glycine max
Glyma.07G259600 0.5kb downstream 0.5kb downstream 500 false Chr07: 43513109-43513608 Glycine max
Glyma.07G259600 1.0kb upstream 1.0kb upstream 2293 true Chr07: 43513609-43515901 Glycine max
Glyma.07G259600 1.0kb upstream 1.0kb upstream 1000 false Chr07: 43514902-43515901 Glycine max
Glyma.07G259600 1.0kb downstream 1.0kb downstream 2293 true Chr07: 43512609-43514901 Glycine max
Glyma.07G259600 1.0kb downstream 1.0kb downstream 1000 false Chr07: 43512609-43513608 Glycine max
Glyma.07G259600 2.0kb upstream 2.0kb upstream 3293 true Chr07: 43513609-43516901 Glycine max
Glyma.07G259600 2.0kb upstream 2.0kb upstream 2000 false Chr07: 43514902-43516901 Glycine max
Glyma.07G259600 2.0kb downstream 2.0kb downstream 3293 true Chr07: 43511609-43514901 Glycine max
Glyma.07G259600 2.0kb downstream 2.0kb downstream 2000 false Chr07: 43511609-43513608 Glycine max
Glyma.07G259600 5.0kb upstream 5.0kb upstream 6293 true Chr07: 43513609-43519901 Glycine max
Glyma.07G259600 5.0kb upstream 5.0kb upstream 5000 false Chr07: 43514902-43519901 Glycine max
Glyma.07G259600 5.0kb downstream 5.0kb downstream 6293 true Chr07: 43508609-43514901 Glycine max
Glyma.07G259600 5.0kb downstream 5.0kb downstream 5000 false Chr07: 43508609-43513608 Glycine max
Glyma.07G259600 10.0kb upstream 10.0kb upstream 11293 true Chr07: 43513609-43524901 Glycine max
Glyma.07G259600 10.0kb upstream 10.0kb upstream 10000 false Chr07: 43514902-43524901 Glycine max
Glyma.07G259600 10.0kb downstream 10.0kb downstream 11293 true Chr07: 43503609-43514901 Glycine max
Glyma.07G259600 10.0kb downstream 10.0kb downstream 10000 false Chr07: 43503609-43513608 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311886 5265 Fabidae View MSA
124060982 5270 Rosid View MSA
123743810 5271 Pentapetalae View MSA
122794319 5272 Eudicot View MSA
122045641 5273 Angiosperm View MSA
121350221 5274 Embryophyte View MSA
123381629 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0156925 0.0 0.0711659 Low Low
cufflinks 0.100587 0.0 0.401857 Low High
cufflinks 0.0514566 0.0 0.211909 Low  
cufflinks 0.0681088 0.0 0.276682 Low  
cufflinks 0.0897082 0.0 0.360129 Low  
cufflinks 0.0284323 0.0 0.122455 Low  
cufflinks 0.01538 0.0 0.0696091 Low Low
cufflinks 0.0641782 0.0 0.261464 Low  
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.188        
cufflinks 0.024     Low  
cufflinks 0.071     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.137       High
cufflinks 0.032     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low  
cufflinks 0.014     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.034     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain