Gene : Glyma.07G263100 G. max Wm82.a2.v1
Defline:  (1 of 4) 6.1.1.4 - Leucine--tRNA ligase / Leucyl-tRNA synthetase Genomic Order:  2631
Name:  ? Glyma.07G263100 Secondary Identifier:  ? PAC:30493130
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax TRNA-CHARGING-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G263100 0.5kb upstream 0.5kb upstream 9087 true Chr07: 43742217-43751303 Glycine max
Glyma.07G263100 0.5kb upstream 0.5kb upstream 500 false Chr07: 43750804-43751303 Glycine max
Glyma.07G263100 0.5kb downstream 0.5kb downstream 9087 true Chr07: 43741717-43750803 Glycine max
Glyma.07G263100 0.5kb downstream 0.5kb downstream 500 false Chr07: 43741717-43742216 Glycine max
Glyma.07G263100 1.0kb upstream 1.0kb upstream 9587 true Chr07: 43742217-43751803 Glycine max
Glyma.07G263100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 43750804-43751803 Glycine max
Glyma.07G263100 1.0kb downstream 1.0kb downstream 9587 true Chr07: 43741217-43750803 Glycine max
Glyma.07G263100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 43741217-43742216 Glycine max
Glyma.07G263100 2.0kb upstream 2.0kb upstream 10587 true Chr07: 43742217-43752803 Glycine max
Glyma.07G263100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 43750804-43752803 Glycine max
Glyma.07G263100 2.0kb downstream 2.0kb downstream 10587 true Chr07: 43740217-43750803 Glycine max
Glyma.07G263100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 43740217-43742216 Glycine max
Glyma.07G263100 5.0kb upstream 5.0kb upstream 13587 true Chr07: 43742217-43755803 Glycine max
Glyma.07G263100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 43750804-43755803 Glycine max
Glyma.07G263100 5.0kb downstream 5.0kb downstream 13587 true Chr07: 43737217-43750803 Glycine max
Glyma.07G263100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 43737217-43742216 Glycine max
Glyma.07G263100 10.0kb upstream 10.0kb upstream 18587 true Chr07: 43742217-43760803 Glycine max
Glyma.07G263100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 43750804-43760803 Glycine max
Glyma.07G263100 10.0kb downstream 10.0kb downstream 18587 true Chr07: 43732217-43750803 Glycine max
Glyma.07G263100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 43732217-43742216 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041369 5273 Angiosperm View MSA
122306893 5265 Fabidae View MSA
124073421 5270 Rosid View MSA
123749958 5271 Pentapetalae View MSA
122789048 5272 Eudicot View MSA
121347479 5274 Embryophyte View MSA
123424257 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.1549 0.0 42.0202   High
cufflinks 7.06789 0.0 24.2985   High
cufflinks 3.66663 0.0 13.7497    
cufflinks 3.67472 0.0 13.8173    
cufflinks 3.3427 0.0 15.2722    
cufflinks 1.99743 0.0 7.59204   Low
cufflinks 2.76682 0.0 9.60596    
cufflinks 4.52514 0.0 16.2869    
cufflinks 2.32826 0.0 10.6798    
cufflinks 0.642        
cufflinks 0.323        
cufflinks 0.725        
cufflinks 0.412        
cufflinks 0.389        
cufflinks 0.42        
cufflinks 4.293       High
cufflinks 0.228       Low
cufflinks 0.795        
cufflinks 1.531        
cufflinks 4.95       High
cufflinks 0.382        
cufflinks 4.406       High
cufflinks 3.083       High
cufflinks 0.453        
cufflinks 4.492       High
cufflinks 0.359        

0 Strain