Gene : Glyma.07G252100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10799//PTHR10799:SF783 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED Genomic Order:  2521
Name:  ? Glyma.07G252100 Secondary Identifier:  ? PAC:30491638
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G252100 0.5kb upstream 0.5kb upstream 24560 true Chr07: 42958063-42982622 Glycine max
Glyma.07G252100 0.5kb upstream 0.5kb upstream 500 false Chr07: 42958063-42958562 Glycine max
Glyma.07G252100 0.5kb downstream 0.5kb downstream 24560 true Chr07: 42958563-42983122 Glycine max
Glyma.07G252100 0.5kb downstream 0.5kb downstream 500 false Chr07: 42982623-42983122 Glycine max
Glyma.07G252100 1.0kb upstream 1.0kb upstream 25060 true Chr07: 42957563-42982622 Glycine max
Glyma.07G252100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 42957563-42958562 Glycine max
Glyma.07G252100 1.0kb downstream 1.0kb downstream 25060 true Chr07: 42958563-42983622 Glycine max
Glyma.07G252100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 42982623-42983622 Glycine max
Glyma.07G252100 2.0kb upstream 2.0kb upstream 26060 true Chr07: 42956563-42982622 Glycine max
Glyma.07G252100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 42956563-42958562 Glycine max
Glyma.07G252100 2.0kb downstream 2.0kb downstream 26060 true Chr07: 42958563-42984622 Glycine max
Glyma.07G252100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 42982623-42984622 Glycine max
Glyma.07G252100 5.0kb upstream 5.0kb upstream 29060 true Chr07: 42953563-42982622 Glycine max
Glyma.07G252100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 42953563-42958562 Glycine max
Glyma.07G252100 5.0kb downstream 5.0kb downstream 29060 true Chr07: 42958563-42987622 Glycine max
Glyma.07G252100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 42982623-42987622 Glycine max
Glyma.07G252100 10.0kb upstream 10.0kb upstream 34060 true Chr07: 42948563-42982622 Glycine max
Glyma.07G252100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 42948563-42958562 Glycine max
Glyma.07G252100 10.0kb downstream 10.0kb downstream 34060 true Chr07: 42958563-42992622 Glycine max
Glyma.07G252100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 42982623-42992622 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309678 5265 Fabidae View MSA
124062912 5270 Rosid View MSA
123737195 5271 Pentapetalae View MSA
122791626 5272 Eudicot View MSA
122049865 5273 Angiosperm View MSA
121348487 5274 Embryophyte View MSA
123427983 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.2171 0.0 31.1095    
cufflinks 8.66147 0.0 25.6878    
cufflinks 14.1611 0.0 46.1392   High
cufflinks 9.36489 0.0 28.1927    
cufflinks 6.32597 0.0 17.9645    
cufflinks 5.22837 0.0 14.5566   Low
cufflinks 11.1158 0.0 34.182    
cufflinks 6.70937 0.0 19.2625    
cufflinks 7.22448 0.0 20.8913    
cufflinks 5.05       Low
cufflinks 6.453     High  
cufflinks 9.53     High  
cufflinks 5.45       Low
cufflinks 5.353       Low
cufflinks 7.531     High  
cufflinks 10.011     High  
cufflinks 3.803       Low
cufflinks 8.944     High  
cufflinks 10.429     High High
cufflinks 9.959     High  
cufflinks 6.756     High  
cufflinks 10.864     High High
cufflinks 8.444     High  
cufflinks 8.253     High  
cufflinks 9.982     High  
cufflinks 6.319     High  

0 Strain