Gene : Glyma.07G253600 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR31621:SF1 - DUF679 DOMAIN MEMBRANE PROTEIN 1 Genomic Order:  2536
Name:  ? Glyma.07G253600 Secondary Identifier:  ? PAC:30491784
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G253600 0.5kb upstream 0.5kb upstream 1597 true Chr07: 43070283-43071879 Glycine max
Glyma.07G253600 0.5kb upstream 0.5kb upstream 500 false Chr07: 43070283-43070782 Glycine max
Glyma.07G253600 0.5kb downstream 0.5kb downstream 1597 true Chr07: 43070783-43072379 Glycine max
Glyma.07G253600 0.5kb downstream 0.5kb downstream 500 false Chr07: 43071880-43072379 Glycine max
Glyma.07G253600 1.0kb upstream 1.0kb upstream 2097 true Chr07: 43069783-43071879 Glycine max
Glyma.07G253600 1.0kb upstream 1.0kb upstream 1000 false Chr07: 43069783-43070782 Glycine max
Glyma.07G253600 1.0kb downstream 1.0kb downstream 2097 true Chr07: 43070783-43072879 Glycine max
Glyma.07G253600 1.0kb downstream 1.0kb downstream 1000 false Chr07: 43071880-43072879 Glycine max
Glyma.07G253600 2.0kb upstream 2.0kb upstream 3097 true Chr07: 43068783-43071879 Glycine max
Glyma.07G253600 2.0kb upstream 2.0kb upstream 2000 false Chr07: 43068783-43070782 Glycine max
Glyma.07G253600 2.0kb downstream 2.0kb downstream 3097 true Chr07: 43070783-43073879 Glycine max
Glyma.07G253600 2.0kb downstream 2.0kb downstream 2000 false Chr07: 43071880-43073879 Glycine max
Glyma.07G253600 5.0kb upstream 5.0kb upstream 6097 true Chr07: 43065783-43071879 Glycine max
Glyma.07G253600 5.0kb upstream 5.0kb upstream 5000 false Chr07: 43065783-43070782 Glycine max
Glyma.07G253600 5.0kb downstream 5.0kb downstream 6097 true Chr07: 43070783-43076879 Glycine max
Glyma.07G253600 5.0kb downstream 5.0kb downstream 5000 false Chr07: 43071880-43076879 Glycine max
Glyma.07G253600 10.0kb upstream 10.0kb upstream 11097 true Chr07: 43060783-43071879 Glycine max
Glyma.07G253600 10.0kb upstream 10.0kb upstream 10000 false Chr07: 43060783-43070782 Glycine max
Glyma.07G253600 10.0kb downstream 10.0kb downstream 11097 true Chr07: 43070783-43081879 Glycine max
Glyma.07G253600 10.0kb downstream 10.0kb downstream 10000 false Chr07: 43071880-43081879 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254193 5265 Fabidae View MSA
124066141 5270 Rosid View MSA
123749826 5271 Pentapetalae View MSA
122795559 5272 Eudicot View MSA
122046671 5273 Angiosperm View MSA
121349168 5274 Embryophyte View MSA
123426818 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.121251 0.0 0.488692 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.36709 0.0 4.94343    
cufflinks 2.03573 0.0 7.15714    
cufflinks 0.0199239 0.0 0.0912554 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.07114 0.0 3.9328    
cufflinks 0.013     Low Low
cufflinks 10.634     High High
cufflinks 0.052     Low  
cufflinks 0.911        
cufflinks 0.044     Low  
cufflinks 0.35        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 16.267     High High
cufflinks 0.024     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.049     Low  
cufflinks 1.257        
cufflinks 0.045     Low  
cufflinks 0.057     Low  
cufflinks 18.827     High High
cufflinks 0.013     Low Low
cufflinks 25.487     High High

0 Strain