Gene : Glyma.07G254000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11570:SF1 - S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME Genomic Order:  2540
Name:  ? Glyma.07G254000 Secondary Identifier:  ? PAC:30493466
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ARGSPECAT-PWY Glycine max pathologic  
Gmax BSUBPOLYAMSYN-PWY Glycine max pathologic  
Gmax POLYAMINSYN3-PWY Glycine max pathologic  
Gmax PWY-7528 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G254000 0.5kb upstream 0.5kb upstream 2818 true Chr07: 43099064-43101881 Glycine max
Glyma.07G254000 0.5kb upstream 0.5kb upstream 500 false Chr07: 43101382-43101881 Glycine max
Glyma.07G254000 0.5kb downstream 0.5kb downstream 2818 true Chr07: 43098564-43101381 Glycine max
Glyma.07G254000 0.5kb downstream 0.5kb downstream 500 false Chr07: 43098564-43099063 Glycine max
Glyma.07G254000 1.0kb upstream 1.0kb upstream 3318 true Chr07: 43099064-43102381 Glycine max
Glyma.07G254000 1.0kb upstream 1.0kb upstream 1000 false Chr07: 43101382-43102381 Glycine max
Glyma.07G254000 1.0kb downstream 1.0kb downstream 3318 true Chr07: 43098064-43101381 Glycine max
Glyma.07G254000 1.0kb downstream 1.0kb downstream 1000 false Chr07: 43098064-43099063 Glycine max
Glyma.07G254000 2.0kb upstream 2.0kb upstream 4318 true Chr07: 43099064-43103381 Glycine max
Glyma.07G254000 2.0kb upstream 2.0kb upstream 2000 false Chr07: 43101382-43103381 Glycine max
Glyma.07G254000 2.0kb downstream 2.0kb downstream 4318 true Chr07: 43097064-43101381 Glycine max
Glyma.07G254000 2.0kb downstream 2.0kb downstream 2000 false Chr07: 43097064-43099063 Glycine max
Glyma.07G254000 5.0kb upstream 5.0kb upstream 7318 true Chr07: 43099064-43106381 Glycine max
Glyma.07G254000 5.0kb upstream 5.0kb upstream 5000 false Chr07: 43101382-43106381 Glycine max
Glyma.07G254000 5.0kb downstream 5.0kb downstream 7318 true Chr07: 43094064-43101381 Glycine max
Glyma.07G254000 5.0kb downstream 5.0kb downstream 5000 false Chr07: 43094064-43099063 Glycine max
Glyma.07G254000 10.0kb upstream 10.0kb upstream 12318 true Chr07: 43099064-43111381 Glycine max
Glyma.07G254000 10.0kb upstream 10.0kb upstream 10000 false Chr07: 43101382-43111381 Glycine max
Glyma.07G254000 10.0kb downstream 10.0kb downstream 12318 true Chr07: 43089064-43101381 Glycine max
Glyma.07G254000 10.0kb downstream 10.0kb downstream 10000 false Chr07: 43089064-43099063 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310071 5265 Fabidae View MSA
124061070 5270 Rosid View MSA
123751266 5271 Pentapetalae View MSA
122795098 5272 Eudicot View MSA
122049143 5273 Angiosperm View MSA
121348944 5274 Embryophyte View MSA
123423800 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.123477 0.0 0.483566 Low  
cufflinks 1.32576 0.0 4.53988   High
cufflinks 0.233397 0.0 0.89079    
cufflinks 0.85998 0.0 3.05649    
cufflinks 0.411783 0.0 1.5285    
cufflinks 0.0419533 0.0 0.171527 Low Low
cufflinks 0.270954 0.0 1.0256    
cufflinks 0.767746 0.0 2.74989    
cufflinks 1.5728 0.0 5.269   High
cufflinks 0.118        
cufflinks 0.009     Low Low
cufflinks 0.402        
cufflinks 0.074     Low  
cufflinks 0.034     Low  
cufflinks 0.176        
cufflinks 0.419        
cufflinks 0.013     Low Low
cufflinks 0.261        
cufflinks 1.22       High
cufflinks 0.466        
cufflinks 0.027     Low Low
cufflinks 0.441        
cufflinks 0.803       High
cufflinks 0.031     Low  
cufflinks 0.396        
cufflinks 0.033     Low  

0 Strain