Gene : Glyma.07G254500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31307:SF3 - ALCOHOL DEHYDROGENASE TRANSCRIPTION FACTOR MYB/SANT-LIKE PROTEIN Genomic Order:  2545
Name:  ? Glyma.07G254500 Secondary Identifier:  ? PAC:30493639
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G254500 0.5kb upstream 0.5kb upstream 1172 true Chr07: 43132529-43133700 Glycine max
Glyma.07G254500 0.5kb upstream 0.5kb upstream 500 false Chr07: 43133201-43133700 Glycine max
Glyma.07G254500 0.5kb downstream 0.5kb downstream 1172 true Chr07: 43132029-43133200 Glycine max
Glyma.07G254500 0.5kb downstream 0.5kb downstream 500 false Chr07: 43132029-43132528 Glycine max
Glyma.07G254500 1.0kb upstream 1.0kb upstream 1672 true Chr07: 43132529-43134200 Glycine max
Glyma.07G254500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 43133201-43134200 Glycine max
Glyma.07G254500 1.0kb downstream 1.0kb downstream 1672 true Chr07: 43131529-43133200 Glycine max
Glyma.07G254500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 43131529-43132528 Glycine max
Glyma.07G254500 2.0kb upstream 2.0kb upstream 2672 true Chr07: 43132529-43135200 Glycine max
Glyma.07G254500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 43133201-43135200 Glycine max
Glyma.07G254500 2.0kb downstream 2.0kb downstream 2672 true Chr07: 43130529-43133200 Glycine max
Glyma.07G254500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 43130529-43132528 Glycine max
Glyma.07G254500 5.0kb upstream 5.0kb upstream 5672 true Chr07: 43132529-43138200 Glycine max
Glyma.07G254500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 43133201-43138200 Glycine max
Glyma.07G254500 5.0kb downstream 5.0kb downstream 5672 true Chr07: 43127529-43133200 Glycine max
Glyma.07G254500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 43127529-43132528 Glycine max
Glyma.07G254500 10.0kb upstream 10.0kb upstream 10672 true Chr07: 43132529-43143200 Glycine max
Glyma.07G254500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 43133201-43143200 Glycine max
Glyma.07G254500 10.0kb downstream 10.0kb downstream 10672 true Chr07: 43122529-43133200 Glycine max
Glyma.07G254500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 43122529-43132528 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121607277 5273 Angiosperm Singleton cluster - no MSA
122238538 5265 Fabidae Singleton cluster - no MSA
123983942 5270 Rosid Singleton cluster - no MSA
123559498 5271 Pentapetalae Singleton cluster - no MSA
122594304 5272 Eudicot Singleton cluster - no MSA
120879558 5274 Embryophyte Singleton cluster - no MSA
122920433 5275 Viridiplantae Singleton cluster - no MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.7323 0.0 72.1808 High  
cufflinks 19.0394 0.0 60.0151    
cufflinks 9.38202 0.0 32.1638   Low
cufflinks 23.1385 0.0 70.2251 High  
cufflinks 20.1604 0.0 61.9051 High  
cufflinks 12.6333 0.0 41.8905   Low
cufflinks 23.3065 0.0 70.4736 High  
cufflinks 19.8391 0.0 61.5587    
cufflinks 18.0867 0.0 56.9261    
cufflinks 8.706     High  
cufflinks 6.626     High Low
cufflinks 9.345     High  
cufflinks 9.021     High  
cufflinks 12.419     High  
cufflinks 7.39     High  
cufflinks 13.456     High High
cufflinks 5.488       Low
cufflinks 11.143     High  
cufflinks 13.009     High  
cufflinks 14.072     High High
cufflinks 6.29     High Low
cufflinks 13.727     High High
cufflinks 13.122     High  
cufflinks 6.878     High Low
cufflinks 13.229     High  
cufflinks 8.748     High  

0 Strain