Gene : Glyma.07G246900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12606//PTHR12606:SF23 - SENTRIN/SUMO-SPECIFIC PROTEASE Genomic Order:  2469
Name:  ? Glyma.07G246900 Secondary Identifier:  ? PAC:30493404
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G246900 0.5kb upstream 0.5kb upstream 8081 true Chr07: 42581544-42589624 Glycine max
Glyma.07G246900 0.5kb upstream 0.5kb upstream 500 false Chr07: 42589125-42589624 Glycine max
Glyma.07G246900 0.5kb downstream 0.5kb downstream 8081 true Chr07: 42581044-42589124 Glycine max
Glyma.07G246900 0.5kb downstream 0.5kb downstream 500 false Chr07: 42581044-42581543 Glycine max
Glyma.07G246900 1.0kb upstream 1.0kb upstream 8581 true Chr07: 42581544-42590124 Glycine max
Glyma.07G246900 1.0kb upstream 1.0kb upstream 1000 false Chr07: 42589125-42590124 Glycine max
Glyma.07G246900 1.0kb downstream 1.0kb downstream 8581 true Chr07: 42580544-42589124 Glycine max
Glyma.07G246900 1.0kb downstream 1.0kb downstream 1000 false Chr07: 42580544-42581543 Glycine max
Glyma.07G246900 2.0kb upstream 2.0kb upstream 9581 true Chr07: 42581544-42591124 Glycine max
Glyma.07G246900 2.0kb upstream 2.0kb upstream 2000 false Chr07: 42589125-42591124 Glycine max
Glyma.07G246900 2.0kb downstream 2.0kb downstream 9581 true Chr07: 42579544-42589124 Glycine max
Glyma.07G246900 2.0kb downstream 2.0kb downstream 2000 false Chr07: 42579544-42581543 Glycine max
Glyma.07G246900 5.0kb upstream 5.0kb upstream 12581 true Chr07: 42581544-42594124 Glycine max
Glyma.07G246900 5.0kb upstream 5.0kb upstream 5000 false Chr07: 42589125-42594124 Glycine max
Glyma.07G246900 5.0kb downstream 5.0kb downstream 12581 true Chr07: 42576544-42589124 Glycine max
Glyma.07G246900 5.0kb downstream 5.0kb downstream 5000 false Chr07: 42576544-42581543 Glycine max
Glyma.07G246900 10.0kb upstream 10.0kb upstream 17581 true Chr07: 42581544-42599124 Glycine max
Glyma.07G246900 10.0kb upstream 10.0kb upstream 10000 false Chr07: 42589125-42599124 Glycine max
Glyma.07G246900 10.0kb downstream 10.0kb downstream 17581 true Chr07: 42571544-42589124 Glycine max
Glyma.07G246900 10.0kb downstream 10.0kb downstream 10000 false Chr07: 42571544-42581543 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311892 5265 Fabidae View MSA
124062657 5270 Rosid View MSA
123737823 5271 Pentapetalae View MSA
122797734 5272 Eudicot View MSA
122046617 5273 Angiosperm View MSA
121348677 5274 Embryophyte View MSA
123380965 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.82022 0.0 49.0303   High
cufflinks 5.87718 0.0 30.539    
cufflinks 8.17739 0.0 50.1071   High
cufflinks 5.93694 0.0 39.5589    
cufflinks 5.38519 0.0 31.757    
cufflinks 3.80991 0.0 19.4515   Low
cufflinks 6.45739 0.0 30.6222    
cufflinks 5.67067 0.0 27.465    
cufflinks 5.58044 0.0 29.5715    
cufflinks 0.147       Low
cufflinks 0.294        
cufflinks 0.361        
cufflinks 0.17       Low
cufflinks 0.199       Low
cufflinks 0.405       High
cufflinks 0.352        
cufflinks 0.179       Low
cufflinks 0.386        
cufflinks 0.331        
cufflinks 0.384        
cufflinks 0.278        
cufflinks 0.369        
cufflinks 0.334        
cufflinks 0.269        
cufflinks 0.355        
cufflinks 0.234        

0 Strain