Gene : Glyma.07G249000 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11064:SF42 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-5 Genomic Order:  2490
Name:  ? Glyma.07G249000 Secondary Identifier:  ? PAC:30493282
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G249000 0.5kb upstream 0.5kb upstream 1526 true Chr07: 42721192-42722717 Glycine max
Glyma.07G249000 0.5kb upstream 0.5kb upstream 500 false Chr07: 42721192-42721691 Glycine max
Glyma.07G249000 0.5kb downstream 0.5kb downstream 1526 true Chr07: 42721692-42723217 Glycine max
Glyma.07G249000 0.5kb downstream 0.5kb downstream 500 false Chr07: 42722718-42723217 Glycine max
Glyma.07G249000 1.0kb upstream 1.0kb upstream 2026 true Chr07: 42720692-42722717 Glycine max
Glyma.07G249000 1.0kb upstream 1.0kb upstream 1000 false Chr07: 42720692-42721691 Glycine max
Glyma.07G249000 1.0kb downstream 1.0kb downstream 2026 true Chr07: 42721692-42723717 Glycine max
Glyma.07G249000 1.0kb downstream 1.0kb downstream 1000 false Chr07: 42722718-42723717 Glycine max
Glyma.07G249000 2.0kb upstream 2.0kb upstream 3026 true Chr07: 42719692-42722717 Glycine max
Glyma.07G249000 2.0kb upstream 2.0kb upstream 2000 false Chr07: 42719692-42721691 Glycine max
Glyma.07G249000 2.0kb downstream 2.0kb downstream 3026 true Chr07: 42721692-42724717 Glycine max
Glyma.07G249000 2.0kb downstream 2.0kb downstream 2000 false Chr07: 42722718-42724717 Glycine max
Glyma.07G249000 5.0kb upstream 5.0kb upstream 6026 true Chr07: 42716692-42722717 Glycine max
Glyma.07G249000 5.0kb upstream 5.0kb upstream 5000 false Chr07: 42716692-42721691 Glycine max
Glyma.07G249000 5.0kb downstream 5.0kb downstream 6026 true Chr07: 42721692-42727717 Glycine max
Glyma.07G249000 5.0kb downstream 5.0kb downstream 5000 false Chr07: 42722718-42727717 Glycine max
Glyma.07G249000 10.0kb upstream 10.0kb upstream 11026 true Chr07: 42711692-42722717 Glycine max
Glyma.07G249000 10.0kb upstream 10.0kb upstream 10000 false Chr07: 42711692-42721691 Glycine max
Glyma.07G249000 10.0kb downstream 10.0kb downstream 11026 true Chr07: 42721692-42732717 Glycine max
Glyma.07G249000 10.0kb downstream 10.0kb downstream 10000 false Chr07: 42722718-42732717 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041139 5273 Angiosperm View MSA
122315080 5265 Fabidae View MSA
124070521 5270 Rosid View MSA
123747842 5271 Pentapetalae View MSA
122796503 5272 Eudicot View MSA
123429094 5275 Viridiplantae View MSA
121350139 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0492623 0.0 0.209931 Low  
cufflinks 0.0236127 0.0 0.107084 Low  
cufflinks 0.029538 0.0 0.130745 Low  
cufflinks 0.039207 0.0 0.169828 Low  
cufflinks 1.0789 0.0 3.97018    
cufflinks 0.458995 0.0 1.75831    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0238875 0.0 0.108114 Low  
cufflinks 19.158 0.0 52.1075   High
cufflinks 0.314        
cufflinks 0.385       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.079     Low  
cufflinks 0.071     Low  
cufflinks 2.095       High
cufflinks 0.036     Low  
cufflinks 0.14        
cufflinks 0.042     Low  
cufflinks 0.071     Low  
cufflinks 0.038     Low  
cufflinks 0.147        
cufflinks 0.028     Low  
cufflinks 0.018     Low Low
cufflinks 0.427       High
cufflinks 0.019     Low Low
cufflinks 0.299        

0 Strain