Gene : Glyma.07G239900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21495//PTHR21495:SF69 - NUCLEOPORIN-RELATED Genomic Order:  2399
Name:  ? Glyma.07G239900 Secondary Identifier:  ? PAC:30493635
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G239900 0.5kb upstream 0.5kb upstream 1043 true Chr07: 42061563-42062605 Glycine max
Glyma.07G239900 0.5kb upstream 0.5kb upstream 500 false Chr07: 42062106-42062605 Glycine max
Glyma.07G239900 0.5kb downstream 0.5kb downstream 1043 true Chr07: 42061063-42062105 Glycine max
Glyma.07G239900 0.5kb downstream 0.5kb downstream 500 false Chr07: 42061063-42061562 Glycine max
Glyma.07G239900 1.0kb upstream 1.0kb upstream 1543 true Chr07: 42061563-42063105 Glycine max
Glyma.07G239900 1.0kb upstream 1.0kb upstream 1000 false Chr07: 42062106-42063105 Glycine max
Glyma.07G239900 1.0kb downstream 1.0kb downstream 1543 true Chr07: 42060563-42062105 Glycine max
Glyma.07G239900 1.0kb downstream 1.0kb downstream 1000 false Chr07: 42060563-42061562 Glycine max
Glyma.07G239900 2.0kb upstream 2.0kb upstream 2543 true Chr07: 42061563-42064105 Glycine max
Glyma.07G239900 2.0kb upstream 2.0kb upstream 2000 false Chr07: 42062106-42064105 Glycine max
Glyma.07G239900 2.0kb downstream 2.0kb downstream 2543 true Chr07: 42059563-42062105 Glycine max
Glyma.07G239900 2.0kb downstream 2.0kb downstream 2000 false Chr07: 42059563-42061562 Glycine max
Glyma.07G239900 5.0kb upstream 5.0kb upstream 5543 true Chr07: 42061563-42067105 Glycine max
Glyma.07G239900 5.0kb upstream 5.0kb upstream 5000 false Chr07: 42062106-42067105 Glycine max
Glyma.07G239900 5.0kb downstream 5.0kb downstream 5543 true Chr07: 42056563-42062105 Glycine max
Glyma.07G239900 5.0kb downstream 5.0kb downstream 5000 false Chr07: 42056563-42061562 Glycine max
Glyma.07G239900 10.0kb upstream 10.0kb upstream 10543 true Chr07: 42061563-42072105 Glycine max
Glyma.07G239900 10.0kb upstream 10.0kb upstream 10000 false Chr07: 42062106-42072105 Glycine max
Glyma.07G239900 10.0kb downstream 10.0kb downstream 10543 true Chr07: 42051563-42062105 Glycine max
Glyma.07G239900 10.0kb downstream 10.0kb downstream 10000 false Chr07: 42051563-42061562 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779389 5273 Angiosperm View MSA
122314276 5265 Fabidae View MSA
124069736 5270 Rosid View MSA
123742633 5271 Pentapetalae View MSA
122770334 5272 Eudicot View MSA
121351582 5274 Embryophyte View MSA
123382236 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.195749 0.0 0.797443 Low Low
cufflinks 0.143493 0.0 0.595036 Low Low
cufflinks 0.568675 0.0 2.22407    
cufflinks 0.725605 0.0 2.80454    
cufflinks 7.40405 0.0 24.2772    
cufflinks 24.3043 0.0 68.7317 High High
cufflinks 0.705418 0.0 2.72244    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 5.52933 0.0 18.8594    
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.073        
cufflinks 0.227        
cufflinks 1.66       High
cufflinks 0.19        
cufflinks 0.033     Low Low
cufflinks 0.13        
cufflinks 3.098       High
cufflinks 0.243        
cufflinks 0.027     Low Low
cufflinks 0.128        
cufflinks 0.554        
cufflinks 0.081     Low  
cufflinks 0.029     Low Low
cufflinks 0.551        
cufflinks 0.076     Low  
cufflinks 0.137        

0 Strain