Gene : Glyma.07G240400 G. max Wm82.a2.v1
Defline:  (1 of 70) PF03140 - Plant protein of unknown function (DUF247) Genomic Order:  2404
Name:  ? Glyma.07G240400 Secondary Identifier:  ? PAC:30492934
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G240400 0.5kb upstream 0.5kb upstream 2826 true Chr07: 42114452-42117277 Glycine max
Glyma.07G240400 0.5kb upstream 0.5kb upstream 500 false Chr07: 42114452-42114951 Glycine max
Glyma.07G240400 0.5kb downstream 0.5kb downstream 2826 true Chr07: 42114952-42117777 Glycine max
Glyma.07G240400 0.5kb downstream 0.5kb downstream 500 false Chr07: 42117278-42117777 Glycine max
Glyma.07G240400 1.0kb upstream 1.0kb upstream 3326 true Chr07: 42113952-42117277 Glycine max
Glyma.07G240400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 42113952-42114951 Glycine max
Glyma.07G240400 1.0kb downstream 1.0kb downstream 3326 true Chr07: 42114952-42118277 Glycine max
Glyma.07G240400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 42117278-42118277 Glycine max
Glyma.07G240400 2.0kb upstream 2.0kb upstream 4326 true Chr07: 42112952-42117277 Glycine max
Glyma.07G240400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 42112952-42114951 Glycine max
Glyma.07G240400 2.0kb downstream 2.0kb downstream 4326 true Chr07: 42114952-42119277 Glycine max
Glyma.07G240400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 42117278-42119277 Glycine max
Glyma.07G240400 5.0kb upstream 5.0kb upstream 7326 true Chr07: 42109952-42117277 Glycine max
Glyma.07G240400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 42109952-42114951 Glycine max
Glyma.07G240400 5.0kb downstream 5.0kb downstream 7326 true Chr07: 42114952-42122277 Glycine max
Glyma.07G240400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 42117278-42122277 Glycine max
Glyma.07G240400 10.0kb upstream 10.0kb upstream 12326 true Chr07: 42104952-42117277 Glycine max
Glyma.07G240400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 42104952-42114951 Glycine max
Glyma.07G240400 10.0kb downstream 10.0kb downstream 12326 true Chr07: 42114952-42127277 Glycine max
Glyma.07G240400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 42117278-42127277 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305226 5265 Fabidae View MSA
124070263 5270 Rosid View MSA
123753721 5271 Pentapetalae View MSA
122797892 5272 Eudicot View MSA
122051031 5273 Angiosperm View MSA
121351531 5274 Embryophyte View MSA
123382209 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0143275 0.0 0.0647966 Low Low
cufflinks 0.150776 0.0 0.591121 Low  
cufflinks 0.14885 0.0 0.583393 Low  
cufflinks 0.198864 0.0 0.771096    
cufflinks 0.218423 0.0 0.844151 Low  
cufflinks 0.210483 0.0 0.814339 Low  
cufflinks 0.0626596 0.0 0.254173 Low  
cufflinks 0.34561 0.0 1.30749    
cufflinks 0.27974 0.0 1.06834    
cufflinks 0.712       High
cufflinks 0.144        
cufflinks 0.164        
cufflinks 0.424       High
cufflinks 0.099        
cufflinks 0.032     Low Low
cufflinks 0.244        
cufflinks 0.096        
cufflinks 0.315        
cufflinks 0.161        
cufflinks 0.19        
cufflinks 0.176        
cufflinks 0.186        
cufflinks 0.12        
cufflinks 0.089        
cufflinks 0.178        
cufflinks 0.13        

0 Strain