Gene : Glyma.07G242100 G. max Wm82.a2.v1
Defline:  (1 of 5) 6.2.1.1//6.2.1.2 - Acetate--CoA ligase / Acyl-activating enzyme // Butyrate--CoA ligase / Fatty acid thiokinase (medium chain) Genomic Order:  2421
Name:  ? Glyma.07G242100 Secondary Identifier:  ? PAC:30492913
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Sequence Feature Displayer

Ontology Annotation Displayer

13 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-1121 Glycine max pathologic  
Gmax PWY-321 Glycine max pathologic  
Gmax PWY-5136 Glycine max pathologic  
Gmax PWY-5143 Glycine max pathologic  
Gmax PWY-5147 Glycine max pathologic  
Gmax PWY-5156 Glycine max pathologic  
Gmax PWY-561 Glycine max pathologic  
Gmax PWY-5885 Glycine max pathologic  
Gmax PWY-5971 Glycine max pathologic  
Gmax PWY-5989 Glycine max pathologic  
Gmax PWY66-21 Glycine max pathologic  
Gmax PWY-6733 Glycine max pathologic  
Gmax PWY-6803 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G242100 0.5kb upstream 0.5kb upstream 4363 true Chr07: 42201053-42205415 Glycine max
Glyma.07G242100 0.5kb upstream 0.5kb upstream 500 false Chr07: 42201053-42201552 Glycine max
Glyma.07G242100 0.5kb downstream 0.5kb downstream 4363 true Chr07: 42201553-42205915 Glycine max
Glyma.07G242100 0.5kb downstream 0.5kb downstream 500 false Chr07: 42205416-42205915 Glycine max
Glyma.07G242100 1.0kb upstream 1.0kb upstream 4863 true Chr07: 42200553-42205415 Glycine max
Glyma.07G242100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 42200553-42201552 Glycine max
Glyma.07G242100 1.0kb downstream 1.0kb downstream 4863 true Chr07: 42201553-42206415 Glycine max
Glyma.07G242100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 42205416-42206415 Glycine max
Glyma.07G242100 2.0kb upstream 2.0kb upstream 5863 true Chr07: 42199553-42205415 Glycine max
Glyma.07G242100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 42199553-42201552 Glycine max
Glyma.07G242100 2.0kb downstream 2.0kb downstream 5863 true Chr07: 42201553-42207415 Glycine max
Glyma.07G242100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 42205416-42207415 Glycine max
Glyma.07G242100 5.0kb upstream 5.0kb upstream 8863 true Chr07: 42196553-42205415 Glycine max
Glyma.07G242100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 42196553-42201552 Glycine max
Glyma.07G242100 5.0kb downstream 5.0kb downstream 8863 true Chr07: 42201553-42210415 Glycine max
Glyma.07G242100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 42205416-42210415 Glycine max
Glyma.07G242100 10.0kb upstream 10.0kb upstream 13863 true Chr07: 42191553-42205415 Glycine max
Glyma.07G242100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 42191553-42201552 Glycine max
Glyma.07G242100 10.0kb downstream 10.0kb downstream 13863 true Chr07: 42201553-42215415 Glycine max
Glyma.07G242100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 42205416-42215415 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308725 5265 Fabidae View MSA
124067015 5270 Rosid View MSA
123740206 5271 Pentapetalae View MSA
122793693 5272 Eudicot View MSA
122045241 5273 Angiosperm View MSA
121345073 5274 Embryophyte View MSA
123427881 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 40.9317 0.0 114.926 High  
cufflinks 10.7859 0.0 28.99    
cufflinks 51.9414 0.0 150.439 High High
cufflinks 10.9287 0.0 29.3377    
cufflinks 19.7298 0.0 52.7975    
cufflinks 42.8714 0.0 121.175 High  
cufflinks 5.55934 0.0 15.6441   Low
cufflinks 27.6782 0.0 75.1741 High  
cufflinks 23.1469 0.0 62.2831 High  
cufflinks 2.785       Low
cufflinks 21.362     High High
cufflinks 15.162     High High
cufflinks 12.731     High  
cufflinks 7.481     High  
cufflinks 9.747     High  
cufflinks 3.978       Low
cufflinks 4.611        
cufflinks 7.756     High  
cufflinks 5.144        
cufflinks 6.13        
cufflinks 19.308     High High
cufflinks 5.61        
cufflinks 3.941       Low
cufflinks 17.329     High High
cufflinks 5.777        
cufflinks 11.316     High  

0 Strain