Gene : Glyma.07G242300 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR34804:SF1 - CAMP-REGULATED PHOSPHOPROTEIN 19-RELATED PROTEIN Genomic Order:  2423
Name:  ? Glyma.07G242300 Secondary Identifier:  ? PAC:30495182
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G242300 0.5kb upstream 0.5kb upstream 2903 true Chr07: 42215276-42218178 Glycine max
Glyma.07G242300 0.5kb upstream 0.5kb upstream 500 false Chr07: 42215276-42215775 Glycine max
Glyma.07G242300 0.5kb downstream 0.5kb downstream 2903 true Chr07: 42215776-42218678 Glycine max
Glyma.07G242300 0.5kb downstream 0.5kb downstream 500 false Chr07: 42218179-42218678 Glycine max
Glyma.07G242300 1.0kb upstream 1.0kb upstream 3403 true Chr07: 42214776-42218178 Glycine max
Glyma.07G242300 1.0kb upstream 1.0kb upstream 1000 false Chr07: 42214776-42215775 Glycine max
Glyma.07G242300 1.0kb downstream 1.0kb downstream 3403 true Chr07: 42215776-42219178 Glycine max
Glyma.07G242300 1.0kb downstream 1.0kb downstream 1000 false Chr07: 42218179-42219178 Glycine max
Glyma.07G242300 2.0kb upstream 2.0kb upstream 4403 true Chr07: 42213776-42218178 Glycine max
Glyma.07G242300 2.0kb upstream 2.0kb upstream 2000 false Chr07: 42213776-42215775 Glycine max
Glyma.07G242300 2.0kb downstream 2.0kb downstream 4403 true Chr07: 42215776-42220178 Glycine max
Glyma.07G242300 2.0kb downstream 2.0kb downstream 2000 false Chr07: 42218179-42220178 Glycine max
Glyma.07G242300 5.0kb upstream 5.0kb upstream 7403 true Chr07: 42210776-42218178 Glycine max
Glyma.07G242300 5.0kb upstream 5.0kb upstream 5000 false Chr07: 42210776-42215775 Glycine max
Glyma.07G242300 5.0kb downstream 5.0kb downstream 7403 true Chr07: 42215776-42223178 Glycine max
Glyma.07G242300 5.0kb downstream 5.0kb downstream 5000 false Chr07: 42218179-42223178 Glycine max
Glyma.07G242300 10.0kb upstream 10.0kb upstream 12403 true Chr07: 42205776-42218178 Glycine max
Glyma.07G242300 10.0kb upstream 10.0kb upstream 10000 false Chr07: 42205776-42215775 Glycine max
Glyma.07G242300 10.0kb downstream 10.0kb downstream 12403 true Chr07: 42215776-42228178 Glycine max
Glyma.07G242300 10.0kb downstream 10.0kb downstream 10000 false Chr07: 42218179-42228178 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122249823 5265 Fabidae Singleton cluster - no MSA
124060714 5270 Rosid View MSA
123751863 5271 Pentapetalae View MSA
122795534 5272 Eudicot View MSA
122049518 5273 Angiosperm View MSA
121345804 5274 Embryophyte View MSA
123427885 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.288318 0.0 1.17627    
cufflinks 0.0920241 0.0 0.407327 Low Low
cufflinks 1.49887 0.0 5.7157    
cufflinks 0.120513 0.0 0.520365 Low  
cufflinks 6.99857 0.0 24.4788   High
cufflinks 1.88414 0.0 7.10994    
cufflinks 0.421782 0.0 1.68906    
cufflinks 0.144393 0.0 0.615381 Low  
cufflinks 0.019     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.132        
cufflinks 0.109        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.221        
cufflinks 0.008     Low Low
cufflinks 0.372       High
cufflinks 0.044     Low  
cufflinks 0.12        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.075     Low  
cufflinks 0.014     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.217        
cufflinks 0.013     Low Low

0 Strain