Gene : Glyma.07G243900 G. max Wm82.a2.v1
Defline:  (1 of 39) PF00407 - Pathogenesis-related protein Bet v I family (Bet_v_1) Genomic Order:  2439
Name:  ? Glyma.07G243900 Secondary Identifier:  ? PAC:30491351
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G243900 0.5kb upstream 0.5kb upstream 1540 true Chr07: 42355168-42356707 Glycine max
Glyma.07G243900 0.5kb upstream 0.5kb upstream 500 false Chr07: 42355168-42355667 Glycine max
Glyma.07G243900 0.5kb downstream 0.5kb downstream 1540 true Chr07: 42355668-42357207 Glycine max
Glyma.07G243900 0.5kb downstream 0.5kb downstream 500 false Chr07: 42356708-42357207 Glycine max
Glyma.07G243900 1.0kb upstream 1.0kb upstream 2040 true Chr07: 42354668-42356707 Glycine max
Glyma.07G243900 1.0kb upstream 1.0kb upstream 1000 false Chr07: 42354668-42355667 Glycine max
Glyma.07G243900 1.0kb downstream 1.0kb downstream 2040 true Chr07: 42355668-42357707 Glycine max
Glyma.07G243900 1.0kb downstream 1.0kb downstream 1000 false Chr07: 42356708-42357707 Glycine max
Glyma.07G243900 2.0kb upstream 2.0kb upstream 3040 true Chr07: 42353668-42356707 Glycine max
Glyma.07G243900 2.0kb upstream 2.0kb upstream 2000 false Chr07: 42353668-42355667 Glycine max
Glyma.07G243900 2.0kb downstream 2.0kb downstream 3040 true Chr07: 42355668-42358707 Glycine max
Glyma.07G243900 2.0kb downstream 2.0kb downstream 2000 false Chr07: 42356708-42358707 Glycine max
Glyma.07G243900 5.0kb upstream 5.0kb upstream 6040 true Chr07: 42350668-42356707 Glycine max
Glyma.07G243900 5.0kb upstream 5.0kb upstream 5000 false Chr07: 42350668-42355667 Glycine max
Glyma.07G243900 5.0kb downstream 5.0kb downstream 6040 true Chr07: 42355668-42361707 Glycine max
Glyma.07G243900 5.0kb downstream 5.0kb downstream 5000 false Chr07: 42356708-42361707 Glycine max
Glyma.07G243900 10.0kb upstream 10.0kb upstream 11040 true Chr07: 42345668-42356707 Glycine max
Glyma.07G243900 10.0kb upstream 10.0kb upstream 10000 false Chr07: 42345668-42355667 Glycine max
Glyma.07G243900 10.0kb downstream 10.0kb downstream 11040 true Chr07: 42355668-42366707 Glycine max
Glyma.07G243900 10.0kb downstream 10.0kb downstream 10000 false Chr07: 42356708-42366707 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312646 5265 Fabidae View MSA
124072279 5270 Rosid View MSA
123752390 5271 Pentapetalae View MSA
122797871 5272 Eudicot View MSA
122048225 5273 Angiosperm View MSA
121351454 5274 Embryophyte View MSA
123382173 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.2257 0.0 37.3478    
cufflinks 0.517673 0.0 1.97525   Low
cufflinks 19.1683 0.0 52.0959    
cufflinks 2.93055 0.0 10.0379    
cufflinks 12.9851 0.0 36.8329    
cufflinks 88.9953 0.0 246.527 High High
cufflinks 0.298228 0.0 1.16645   Low
cufflinks 4.63657 0.0 14.993    
cufflinks 15.0174 0.0 41.7717    
cufflinks 8.7     High  
cufflinks 371.668     High High
cufflinks 17.395     High  
cufflinks 7.109        
cufflinks 1.718        
cufflinks 153.426     High High
cufflinks 1.007       Low
cufflinks 69.026     High  
cufflinks 3.721        
cufflinks 3.79        
cufflinks 1.494       Low
cufflinks 100.454     High  
cufflinks 2.98        
cufflinks 1.679        
cufflinks 464.42     High High
cufflinks 1.561        
cufflinks 167.516     High High

0 Strain