Gene : Glyma.07G244900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22904:SF169 - RNA POLYMERASE II-ASSOCIATED PROTEIN 3 Genomic Order:  2449
Name:  ? Glyma.07G244900 Secondary Identifier:  ? PAC:30491758
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G244900 0.5kb upstream 0.5kb upstream 4128 true Chr07: 42431894-42436021 Glycine max
Glyma.07G244900 0.5kb upstream 0.5kb upstream 500 false Chr07: 42435522-42436021 Glycine max
Glyma.07G244900 0.5kb downstream 0.5kb downstream 4128 true Chr07: 42431394-42435521 Glycine max
Glyma.07G244900 0.5kb downstream 0.5kb downstream 500 false Chr07: 42431394-42431893 Glycine max
Glyma.07G244900 1.0kb upstream 1.0kb upstream 4628 true Chr07: 42431894-42436521 Glycine max
Glyma.07G244900 1.0kb upstream 1.0kb upstream 1000 false Chr07: 42435522-42436521 Glycine max
Glyma.07G244900 1.0kb downstream 1.0kb downstream 4628 true Chr07: 42430894-42435521 Glycine max
Glyma.07G244900 1.0kb downstream 1.0kb downstream 1000 false Chr07: 42430894-42431893 Glycine max
Glyma.07G244900 2.0kb upstream 2.0kb upstream 5628 true Chr07: 42431894-42437521 Glycine max
Glyma.07G244900 2.0kb upstream 2.0kb upstream 2000 false Chr07: 42435522-42437521 Glycine max
Glyma.07G244900 2.0kb downstream 2.0kb downstream 5628 true Chr07: 42429894-42435521 Glycine max
Glyma.07G244900 2.0kb downstream 2.0kb downstream 2000 false Chr07: 42429894-42431893 Glycine max
Glyma.07G244900 5.0kb upstream 5.0kb upstream 8628 true Chr07: 42431894-42440521 Glycine max
Glyma.07G244900 5.0kb upstream 5.0kb upstream 5000 false Chr07: 42435522-42440521 Glycine max
Glyma.07G244900 5.0kb downstream 5.0kb downstream 8628 true Chr07: 42426894-42435521 Glycine max
Glyma.07G244900 5.0kb downstream 5.0kb downstream 5000 false Chr07: 42426894-42431893 Glycine max
Glyma.07G244900 10.0kb upstream 10.0kb upstream 13628 true Chr07: 42431894-42445521 Glycine max
Glyma.07G244900 10.0kb upstream 10.0kb upstream 10000 false Chr07: 42435522-42445521 Glycine max
Glyma.07G244900 10.0kb downstream 10.0kb downstream 13628 true Chr07: 42421894-42435521 Glycine max
Glyma.07G244900 10.0kb downstream 10.0kb downstream 10000 false Chr07: 42421894-42431893 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026696 5273 Angiosperm View MSA
122303253 5265 Fabidae View MSA
124069433 5270 Rosid View MSA
123746924 5271 Pentapetalae View MSA
122794448 5272 Eudicot View MSA
123429169 5275 Viridiplantae View MSA
121348213 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.1524 0.0 45.4634    
cufflinks 10.063 0.0 31.4298   Low
cufflinks 18.6263 0.0 63.6114    
cufflinks 14.8243 0.0 51.1326    
cufflinks 17.3368 0.0 65.5852    
cufflinks 14.4072 0.0 49.6256    
cufflinks 10.9659 0.0 38.599    
cufflinks 24.0379 0.0 82.8351 High High
cufflinks 9.91146 0.0 35.4731   Low
cufflinks 3.04       High
cufflinks 1.472        
cufflinks 1.783        
cufflinks 2.792       High
cufflinks 3.006       High
cufflinks 0.638       Low
cufflinks 1.769        
cufflinks 1.824        
cufflinks 1.482        
cufflinks 1.902        
cufflinks 1.536        
cufflinks 1.5        
cufflinks 1.691        
cufflinks 1.677        
cufflinks 2.186        
cufflinks 1.411        
cufflinks 1.969        

0 Strain