Gene : Glyma.08G009200 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR10627 - SCP160 Genomic Order:  92
Name:  ? Glyma.08G009200 Secondary Identifier:  ? PAC:30536402
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G009200 0.5kb upstream 0.5kb upstream 3366 true Chr08: 727207-730572 Glycine max
Glyma.08G009200 0.5kb upstream 0.5kb upstream 500 false Chr08: 730073-730572 Glycine max
Glyma.08G009200 0.5kb downstream 0.5kb downstream 3366 true Chr08: 726707-730072 Glycine max
Glyma.08G009200 0.5kb downstream 0.5kb downstream 500 false Chr08: 726707-727206 Glycine max
Glyma.08G009200 1.0kb upstream 1.0kb upstream 3866 true Chr08: 727207-731072 Glycine max
Glyma.08G009200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 730073-731072 Glycine max
Glyma.08G009200 1.0kb downstream 1.0kb downstream 3866 true Chr08: 726207-730072 Glycine max
Glyma.08G009200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 726207-727206 Glycine max
Glyma.08G009200 2.0kb upstream 2.0kb upstream 4866 true Chr08: 727207-732072 Glycine max
Glyma.08G009200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 730073-732072 Glycine max
Glyma.08G009200 2.0kb downstream 2.0kb downstream 4866 true Chr08: 725207-730072 Glycine max
Glyma.08G009200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 725207-727206 Glycine max
Glyma.08G009200 5.0kb upstream 5.0kb upstream 7866 true Chr08: 727207-735072 Glycine max
Glyma.08G009200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 730073-735072 Glycine max
Glyma.08G009200 5.0kb downstream 5.0kb downstream 7866 true Chr08: 722207-730072 Glycine max
Glyma.08G009200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 722207-727206 Glycine max
Glyma.08G009200 10.0kb upstream 10.0kb upstream 12866 true Chr08: 727207-740072 Glycine max
Glyma.08G009200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 730073-740072 Glycine max
Glyma.08G009200 10.0kb downstream 10.0kb downstream 12866 true Chr08: 717207-730072 Glycine max
Glyma.08G009200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 717207-727206 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300138 5265 Fabidae View MSA
124071735 5270 Rosid View MSA
123744350 5271 Pentapetalae View MSA
122788002 5272 Eudicot View MSA
122041679 5273 Angiosperm View MSA
121347667 5274 Embryophyte View MSA
123380594 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.80092 0.0 8.21772    
cufflinks 2.61412 0.0 7.74244    
cufflinks 1.83571 0.0 5.69674   Low
cufflinks 2.40642 0.0 7.20535    
cufflinks 2.63082 0.0 7.7819    
cufflinks 2.31206 0.0 6.95118    
cufflinks 3.15298 0.0 9.10806   High
cufflinks 2.10559 0.0 6.43428    
cufflinks 2.16043 0.0 6.56536    
cufflinks 1.612        
cufflinks 1.262       Low
cufflinks 2.548        
cufflinks 2.036        
cufflinks 2.288        
cufflinks 1.349        
cufflinks 3.017        
cufflinks 0.999       Low
cufflinks 2.785        
cufflinks 2.933        
cufflinks 3.175       High
cufflinks 1.312        
cufflinks 3.295       High
cufflinks 3.179       High
cufflinks 1.069       Low
cufflinks 2.979        
cufflinks 1.027       Low

0 Strain