Gene : Glyma.08G010100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13169:SF3 - MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 3 Genomic Order:  101
Name:  ? Glyma.08G010100 Secondary Identifier:  ? PAC:30540652
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G010100 0.5kb upstream 0.5kb upstream 7740 true Chr08: 796447-804186 Glycine max
Glyma.08G010100 0.5kb upstream 0.5kb upstream 500 false Chr08: 796447-796946 Glycine max
Glyma.08G010100 0.5kb downstream 0.5kb downstream 7740 true Chr08: 796947-804686 Glycine max
Glyma.08G010100 0.5kb downstream 0.5kb downstream 500 false Chr08: 804187-804686 Glycine max
Glyma.08G010100 1.0kb upstream 1.0kb upstream 8240 true Chr08: 795947-804186 Glycine max
Glyma.08G010100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 795947-796946 Glycine max
Glyma.08G010100 1.0kb downstream 1.0kb downstream 8240 true Chr08: 796947-805186 Glycine max
Glyma.08G010100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 804187-805186 Glycine max
Glyma.08G010100 2.0kb upstream 2.0kb upstream 9240 true Chr08: 794947-804186 Glycine max
Glyma.08G010100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 794947-796946 Glycine max
Glyma.08G010100 2.0kb downstream 2.0kb downstream 9240 true Chr08: 796947-806186 Glycine max
Glyma.08G010100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 804187-806186 Glycine max
Glyma.08G010100 5.0kb upstream 5.0kb upstream 12240 true Chr08: 791947-804186 Glycine max
Glyma.08G010100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 791947-796946 Glycine max
Glyma.08G010100 5.0kb downstream 5.0kb downstream 12240 true Chr08: 796947-809186 Glycine max
Glyma.08G010100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 804187-809186 Glycine max
Glyma.08G010100 10.0kb upstream 10.0kb upstream 17240 true Chr08: 786947-804186 Glycine max
Glyma.08G010100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 786947-796946 Glycine max
Glyma.08G010100 10.0kb downstream 10.0kb downstream 17240 true Chr08: 796947-814186 Glycine max
Glyma.08G010100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 804187-814186 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121656707 5273 Angiosperm View MSA
122316040 5265 Fabidae View MSA
124037036 5270 Rosid View MSA
123610158 5271 Pentapetalae View MSA
122644791 5272 Eudicot View MSA
120928776 5274 Embryophyte View MSA
122969369 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.1549 0.0 62.35    
cufflinks 10.2682 0.0 46.4473   Low
cufflinks 29.8925 0.0 111.393 High High
cufflinks 14.9921 0.0 56.5793    
cufflinks 13.4904 0.0 56.1738    
cufflinks 35.8564 0.0 133.78 High High
cufflinks 8.59012 0.0 41.632   Low
cufflinks 23.6937 0.0 90.5824 High  
cufflinks 16.946 0.0 68.6917    
cufflinks 0.524        
cufflinks 0.468        
cufflinks 0.616       High
cufflinks 0.466        
cufflinks 0.459        
cufflinks 0.274       Low
cufflinks 0.35        
cufflinks 0.33        
cufflinks 0.468        
cufflinks 0.294       Low
cufflinks 0.377        
cufflinks 0.508        
cufflinks 0.393        
cufflinks 0.25       Low
cufflinks 0.616       High
cufflinks 0.356        
cufflinks 0.527        

0 Strain