Gene : Glyma.08G001900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10799//PTHR10799:SF654 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED Genomic Order:  19
Name:  ? Glyma.08G001900 Secondary Identifier:  ? PAC:30538475
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G001900 0.5kb upstream 0.5kb upstream 8417 true Chr08: 125437-133853 Glycine max
Glyma.08G001900 0.5kb upstream 0.5kb upstream 500 false Chr08: 125437-125936 Glycine max
Glyma.08G001900 0.5kb downstream 0.5kb downstream 8417 true Chr08: 125937-134353 Glycine max
Glyma.08G001900 0.5kb downstream 0.5kb downstream 500 false Chr08: 133854-134353 Glycine max
Glyma.08G001900 1.0kb upstream 1.0kb upstream 8917 true Chr08: 124937-133853 Glycine max
Glyma.08G001900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 124937-125936 Glycine max
Glyma.08G001900 1.0kb downstream 1.0kb downstream 8917 true Chr08: 125937-134853 Glycine max
Glyma.08G001900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 133854-134853 Glycine max
Glyma.08G001900 2.0kb upstream 2.0kb upstream 9917 true Chr08: 123937-133853 Glycine max
Glyma.08G001900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 123937-125936 Glycine max
Glyma.08G001900 2.0kb downstream 2.0kb downstream 9917 true Chr08: 125937-135853 Glycine max
Glyma.08G001900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 133854-135853 Glycine max
Glyma.08G001900 5.0kb upstream 5.0kb upstream 12917 true Chr08: 120937-133853 Glycine max
Glyma.08G001900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 120937-125936 Glycine max
Glyma.08G001900 5.0kb downstream 5.0kb downstream 12917 true Chr08: 125937-138853 Glycine max
Glyma.08G001900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 133854-138853 Glycine max
Glyma.08G001900 10.0kb upstream 10.0kb upstream 17917 true Chr08: 115937-133853 Glycine max
Glyma.08G001900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 115937-125936 Glycine max
Glyma.08G001900 10.0kb downstream 10.0kb downstream 17917 true Chr08: 125937-143853 Glycine max
Glyma.08G001900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 133854-143853 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310213 5265 Fabidae View MSA
124065294 5270 Rosid View MSA
123741298 5271 Pentapetalae View MSA
122791024 5272 Eudicot View MSA
122047710 5273 Angiosperm View MSA
121346299 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.555096 0.0 1.92093   Low
cufflinks 2.76313 0.0 7.77176    
cufflinks 1.61329 0.0 4.84219    
cufflinks 1.76379 0.0 5.23249    
cufflinks 2.81062 0.0 7.89794    
cufflinks 1.62951 0.0 4.89542    
cufflinks 1.88798 0.0 5.57443    
cufflinks 1.46846 0.0 4.46696    
cufflinks 2.55041 0.0 7.23617    
cufflinks 1.027        
cufflinks 0.375       Low
cufflinks 1.321        
cufflinks 2.342       High
cufflinks 2.567       High
cufflinks 0.381       Low
cufflinks 1.739        
cufflinks 0.548       Low
cufflinks 0.554       Low
cufflinks 2.933       High
cufflinks 1.38        
cufflinks 0.597        
cufflinks 1.613        
cufflinks 2.042        
cufflinks 0.623        
cufflinks 1.323        
cufflinks 1.008        

0 Strain