Gene : Glyma.08G003200 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR31580:SF5 - FILAMENT-LIKE PLANT PROTEIN 3 Genomic Order:  32
Name:  ? Glyma.08G003200 Secondary Identifier:  ? PAC:30537103
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G003200 0.5kb upstream 0.5kb upstream 5697 true Chr08: 246161-251857 Glycine max
Glyma.08G003200 0.5kb upstream 0.5kb upstream 500 false Chr08: 251358-251857 Glycine max
Glyma.08G003200 0.5kb downstream 0.5kb downstream 5697 true Chr08: 245661-251357 Glycine max
Glyma.08G003200 0.5kb downstream 0.5kb downstream 500 false Chr08: 245661-246160 Glycine max
Glyma.08G003200 1.0kb upstream 1.0kb upstream 6197 true Chr08: 246161-252357 Glycine max
Glyma.08G003200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 251358-252357 Glycine max
Glyma.08G003200 1.0kb downstream 1.0kb downstream 6197 true Chr08: 245161-251357 Glycine max
Glyma.08G003200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 245161-246160 Glycine max
Glyma.08G003200 2.0kb upstream 2.0kb upstream 7197 true Chr08: 246161-253357 Glycine max
Glyma.08G003200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 251358-253357 Glycine max
Glyma.08G003200 2.0kb downstream 2.0kb downstream 7197 true Chr08: 244161-251357 Glycine max
Glyma.08G003200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 244161-246160 Glycine max
Glyma.08G003200 5.0kb upstream 5.0kb upstream 10197 true Chr08: 246161-256357 Glycine max
Glyma.08G003200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 251358-256357 Glycine max
Glyma.08G003200 5.0kb downstream 5.0kb downstream 10197 true Chr08: 241161-251357 Glycine max
Glyma.08G003200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 241161-246160 Glycine max
Glyma.08G003200 10.0kb upstream 10.0kb upstream 15197 true Chr08: 246161-261357 Glycine max
Glyma.08G003200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 251358-261357 Glycine max
Glyma.08G003200 10.0kb downstream 10.0kb downstream 15197 true Chr08: 236161-251357 Glycine max
Glyma.08G003200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 236161-246160 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303492 5265 Fabidae View MSA
124071762 5270 Rosid View MSA
123742978 5271 Pentapetalae View MSA
122791145 5272 Eudicot View MSA
122043487 5273 Angiosperm View MSA
121310135 5274 Embryophyte View MSA
123347707 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.80654 0.0 15.9344    
cufflinks 1.21398 0.0 7.13077   Low
cufflinks 3.34148 0.0 16.7279    
cufflinks 3.46679 0.0 17.6589    
cufflinks 1.53255 0.0 8.47801    
cufflinks 8.07612 0.0 28.1555   High
cufflinks 0.940433 0.0 5.97067   Low
cufflinks 2.88287 0.0 11.36    
cufflinks 2.9291 0.0 14.3588    
cufflinks 0.781        
cufflinks 0.65        
cufflinks 0.543        
cufflinks 0.583        
cufflinks 0.268       Low
cufflinks 0.36        
cufflinks 0.555        
cufflinks 0.186       Low
cufflinks 0.785       High
cufflinks 0.248       Low
cufflinks 0.704        
cufflinks 0.363        
cufflinks 0.701        
cufflinks 0.657        
cufflinks 0.73        
cufflinks 0.726        
cufflinks 0.369        

0 Strain