Gene : Glyma.08G003400 G. max Wm82.a2.v1
Genomic Order:  34 Name:  ? Glyma.08G003400
Secondary Identifier:  ? PAC:30541047
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G003400 0.5kb upstream 0.5kb upstream 1562 true Chr08: 261351-262912 Glycine max
Glyma.08G003400 0.5kb upstream 0.5kb upstream 500 false Chr08: 261351-261850 Glycine max
Glyma.08G003400 0.5kb downstream 0.5kb downstream 1562 true Chr08: 261851-263412 Glycine max
Glyma.08G003400 0.5kb downstream 0.5kb downstream 500 false Chr08: 262913-263412 Glycine max
Glyma.08G003400 1.0kb upstream 1.0kb upstream 2062 true Chr08: 260851-262912 Glycine max
Glyma.08G003400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 260851-261850 Glycine max
Glyma.08G003400 1.0kb downstream 1.0kb downstream 2062 true Chr08: 261851-263912 Glycine max
Glyma.08G003400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 262913-263912 Glycine max
Glyma.08G003400 2.0kb upstream 2.0kb upstream 3062 true Chr08: 259851-262912 Glycine max
Glyma.08G003400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 259851-261850 Glycine max
Glyma.08G003400 2.0kb downstream 2.0kb downstream 3062 true Chr08: 261851-264912 Glycine max
Glyma.08G003400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 262913-264912 Glycine max
Glyma.08G003400 5.0kb upstream 5.0kb upstream 6062 true Chr08: 256851-262912 Glycine max
Glyma.08G003400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 256851-261850 Glycine max
Glyma.08G003400 5.0kb downstream 5.0kb downstream 6062 true Chr08: 261851-267912 Glycine max
Glyma.08G003400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 262913-267912 Glycine max
Glyma.08G003400 10.0kb upstream 10.0kb upstream 11062 true Chr08: 251851-262912 Glycine max
Glyma.08G003400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 251851-261850 Glycine max
Glyma.08G003400 10.0kb downstream 10.0kb downstream 11062 true Chr08: 261851-272912 Glycine max
Glyma.08G003400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 262913-272912 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296346 5265 Fabidae View MSA
124035608 5270 Rosid View MSA
123748532 5271 Pentapetalae View MSA
122792835 5272 Eudicot View MSA
122046009 5273 Angiosperm View MSA
121345994 5274 Embryophyte View MSA
123380304 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.114718 0.0 0.46734 Low Low
cufflinks 13.2958 0.0 37.8347    
cufflinks 0.654462 0.0 2.48207   Low
cufflinks 1.923 0.0 6.89078    
cufflinks 7.77734 0.0 23.8272    
cufflinks 7.32417 0.0 22.5607    
cufflinks 6.27241 0.0 19.8497    
cufflinks 13.6452 0.0 38.5565    
cufflinks 9.25885 0.0 27.5344    
cufflinks 11.363     High  
cufflinks 0.163       Low
cufflinks 1.481        
cufflinks 9.169     High  
cufflinks 10.822     High  
cufflinks 0.034     Low Low
cufflinks 7.61     High  
cufflinks 1.62        
cufflinks 1.374        
cufflinks 7.949     High  
cufflinks 6.88     High  
cufflinks 0.224       Low
cufflinks 8.528     High  
cufflinks 11.857     High  
cufflinks 0.174       Low
cufflinks 6.478        
cufflinks 0.919        

0 Strain