Gene : Glyma.08G004700 G. max Wm82.a2.v1
Defline:  (1 of 3) PF02791//PF10537//PF15613//PF15614 - DDT domain (DDT) // ATP-utilising chromatin assembly and remodelling N-terminal (WAC_Acf1_DNA_bd) // WSTF, HB1, Itc1p, MBD9 motif 2 (WHIM2) // WSTF, HB1, Itc1p, MBD9 motif 3 (WHIM3) Genomic Order:  47
Name:  ? Glyma.08G004700 Secondary Identifier:  ? PAC:30541405
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G004700 0.5kb upstream 0.5kb upstream 6490 true Chr08: 370947-377436 Glycine max
Glyma.08G004700 0.5kb upstream 0.5kb upstream 500 false Chr08: 370947-371446 Glycine max
Glyma.08G004700 0.5kb downstream 0.5kb downstream 6490 true Chr08: 371447-377936 Glycine max
Glyma.08G004700 0.5kb downstream 0.5kb downstream 500 false Chr08: 377437-377936 Glycine max
Glyma.08G004700 1.0kb upstream 1.0kb upstream 6990 true Chr08: 370447-377436 Glycine max
Glyma.08G004700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 370447-371446 Glycine max
Glyma.08G004700 1.0kb downstream 1.0kb downstream 6990 true Chr08: 371447-378436 Glycine max
Glyma.08G004700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 377437-378436 Glycine max
Glyma.08G004700 2.0kb upstream 2.0kb upstream 7990 true Chr08: 369447-377436 Glycine max
Glyma.08G004700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 369447-371446 Glycine max
Glyma.08G004700 2.0kb downstream 2.0kb downstream 7990 true Chr08: 371447-379436 Glycine max
Glyma.08G004700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 377437-379436 Glycine max
Glyma.08G004700 5.0kb upstream 5.0kb upstream 10990 true Chr08: 366447-377436 Glycine max
Glyma.08G004700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 366447-371446 Glycine max
Glyma.08G004700 5.0kb downstream 5.0kb downstream 10990 true Chr08: 371447-382436 Glycine max
Glyma.08G004700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 377437-382436 Glycine max
Glyma.08G004700 10.0kb upstream 10.0kb upstream 15990 true Chr08: 361447-377436 Glycine max
Glyma.08G004700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 361447-371446 Glycine max
Glyma.08G004700 10.0kb downstream 10.0kb downstream 15990 true Chr08: 371447-387436 Glycine max
Glyma.08G004700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 377437-387436 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301956 5265 Fabidae View MSA
124067702 5270 Rosid View MSA
123739620 5271 Pentapetalae View MSA
122786030 5272 Eudicot View MSA
122050407 5273 Angiosperm View MSA
121345343 5274 Embryophyte View MSA
123380199 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.2391 0.0 8.69605    
cufflinks 2.85926 0.0 12.0235    
cufflinks 3.83271 0.0 14.6474   High
cufflinks 2.01957 0.0 8.07194    
cufflinks 2.68072 0.0 9.91698    
cufflinks 3.45491 0.0 13.6979    
cufflinks 0.861657 0.0 4.56875   Low
cufflinks 2.24303 0.0 10.3928    
cufflinks 2.61533 0.0 9.67674    
cufflinks 0.539        
cufflinks 0.422        
cufflinks 0.876        
cufflinks 0.941        
cufflinks 0.927        
cufflinks 0.258       Low
cufflinks 0.521        
cufflinks 1.284       High
cufflinks 0.657        
cufflinks 0.893        
cufflinks 0.4       Low
cufflinks 0.438        
cufflinks 0.554        
cufflinks 1.038       High
cufflinks 0.538        
cufflinks 0.462        
cufflinks 1.007       High

0 Strain