Gene : Glyma.08G005700 G. max Wm82.a2.v1
Defline:  (1 of 75) PF05678 - VQ motif (VQ) Genomic Order:  57
Name:  ? Glyma.08G005700 Secondary Identifier:  ? PAC:30541195
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G005700 0.5kb upstream 0.5kb upstream 4682 true Chr08: 456890-461571 Glycine max
Glyma.08G005700 0.5kb upstream 0.5kb upstream 500 false Chr08: 461072-461571 Glycine max
Glyma.08G005700 0.5kb downstream 0.5kb downstream 4682 true Chr08: 456390-461071 Glycine max
Glyma.08G005700 0.5kb downstream 0.5kb downstream 500 false Chr08: 456390-456889 Glycine max
Glyma.08G005700 1.0kb upstream 1.0kb upstream 5182 true Chr08: 456890-462071 Glycine max
Glyma.08G005700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 461072-462071 Glycine max
Glyma.08G005700 1.0kb downstream 1.0kb downstream 5182 true Chr08: 455890-461071 Glycine max
Glyma.08G005700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 455890-456889 Glycine max
Glyma.08G005700 2.0kb upstream 2.0kb upstream 6182 true Chr08: 456890-463071 Glycine max
Glyma.08G005700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 461072-463071 Glycine max
Glyma.08G005700 2.0kb downstream 2.0kb downstream 6182 true Chr08: 454890-461071 Glycine max
Glyma.08G005700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 454890-456889 Glycine max
Glyma.08G005700 5.0kb upstream 5.0kb upstream 9182 true Chr08: 456890-466071 Glycine max
Glyma.08G005700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 461072-466071 Glycine max
Glyma.08G005700 5.0kb downstream 5.0kb downstream 9182 true Chr08: 451890-461071 Glycine max
Glyma.08G005700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 451890-456889 Glycine max
Glyma.08G005700 10.0kb upstream 10.0kb upstream 14182 true Chr08: 456890-471071 Glycine max
Glyma.08G005700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 461072-471071 Glycine max
Glyma.08G005700 10.0kb downstream 10.0kb downstream 14182 true Chr08: 446890-461071 Glycine max
Glyma.08G005700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 446890-456889 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309756 5265 Fabidae View MSA
124071796 5270 Rosid View MSA
123750842 5271 Pentapetalae View MSA
122795090 5272 Eudicot View MSA
122046673 5273 Angiosperm View MSA
121347985 5274 Embryophyte View MSA
123380701 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.805744 0.0 2.82893   High
cufflinks 0.39608 0.0 1.45824    
cufflinks 0.628118 0.0 2.24121    
cufflinks 0.467178 0.0 1.70063    
cufflinks 0.0926767 0.0 0.363985 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.262608 0.0 0.986731    
cufflinks 0.485228 0.0 1.7639    
cufflinks 0.289596 0.0 1.08305    
cufflinks 0.28        
cufflinks 0.115        
cufflinks 0.309        
cufflinks 0.08     Low  
cufflinks 0.063     Low  
cufflinks 0.091        
cufflinks 0.771       High
cufflinks 0.003     Low Low
cufflinks 0.368        
cufflinks 0.302        
cufflinks 0.656        
cufflinks 0.069        
cufflinks 0.917       High
cufflinks 0.444        
cufflinks 0.11        
cufflinks 0.794       High
cufflinks 0.07        

0 Strain