Gene : Glyma.07G273300 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR12654:SF3 - NON-LYSOSOMAL GLUCOSYLCERAMIDASE Genomic Order:  2733
Name:  ? Glyma.07G273300 Secondary Identifier:  ? PAC:30494535
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G273300 0.5kb upstream 0.5kb upstream 10744 true Chr07: 44523603-44534346 Glycine max
Glyma.07G273300 0.5kb upstream 0.5kb upstream 500 false Chr07: 44533847-44534346 Glycine max
Glyma.07G273300 0.5kb downstream 0.5kb downstream 10744 true Chr07: 44523103-44533846 Glycine max
Glyma.07G273300 0.5kb downstream 0.5kb downstream 500 false Chr07: 44523103-44523602 Glycine max
Glyma.07G273300 1.0kb upstream 1.0kb upstream 11244 true Chr07: 44523603-44534846 Glycine max
Glyma.07G273300 1.0kb upstream 1.0kb upstream 1000 false Chr07: 44533847-44534846 Glycine max
Glyma.07G273300 1.0kb downstream 1.0kb downstream 11244 true Chr07: 44522603-44533846 Glycine max
Glyma.07G273300 1.0kb downstream 1.0kb downstream 1000 false Chr07: 44522603-44523602 Glycine max
Glyma.07G273300 2.0kb upstream 2.0kb upstream 12244 true Chr07: 44523603-44535846 Glycine max
Glyma.07G273300 2.0kb upstream 2.0kb upstream 2000 false Chr07: 44533847-44535846 Glycine max
Glyma.07G273300 2.0kb downstream 2.0kb downstream 12244 true Chr07: 44521603-44533846 Glycine max
Glyma.07G273300 2.0kb downstream 2.0kb downstream 2000 false Chr07: 44521603-44523602 Glycine max
Glyma.07G273300 5.0kb upstream 5.0kb upstream 15244 true Chr07: 44523603-44538846 Glycine max
Glyma.07G273300 5.0kb upstream 5.0kb upstream 5000 false Chr07: 44533847-44538846 Glycine max
Glyma.07G273300 5.0kb downstream 5.0kb downstream 15244 true Chr07: 44518603-44533846 Glycine max
Glyma.07G273300 5.0kb downstream 5.0kb downstream 5000 false Chr07: 44518603-44523602 Glycine max
Glyma.07G273300 10.0kb upstream 10.0kb upstream 20244 true Chr07: 44523603-44543846 Glycine max
Glyma.07G273300 10.0kb upstream 10.0kb upstream 10000 false Chr07: 44533847-44543846 Glycine max
Glyma.07G273300 10.0kb downstream 10.0kb downstream 20244 true Chr07: 44513603-44533846 Glycine max
Glyma.07G273300 10.0kb downstream 10.0kb downstream 10000 false Chr07: 44513603-44523602 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301339 5265 Fabidae View MSA
124072113 5270 Rosid View MSA
123744870 5271 Pentapetalae View MSA
122785953 5272 Eudicot View MSA
122042064 5273 Angiosperm View MSA
121351037 5274 Embryophyte View MSA
123425340 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.83943 0.0 2.89172    
cufflinks 1.39307 0.0 4.50638    
cufflinks 1.83261 0.0 5.6664    
cufflinks 0.720144 0.0 2.51279    
cufflinks 1.61274 0.0 5.12361    
cufflinks 2.18611 0.0 6.63036   High
cufflinks 0.424628 0.0 1.5426   Low
cufflinks 0.76189 0.0 2.64562    
cufflinks 1.31659 0.0 4.29439    
cufflinks 1.132        
cufflinks 1.387        
cufflinks 0.898        
cufflinks 0.968        
cufflinks 1.044        
cufflinks 0.518       Low
cufflinks 0.677        
cufflinks 4.538       High
cufflinks 1.216        
cufflinks 0.731        
cufflinks 0.654        
cufflinks 0.977        
cufflinks 0.545       Low
cufflinks 1.008        
cufflinks 1.18        
cufflinks 0.612        
cufflinks 3.21       High

0 Strain