Gene : Glyma.07G267500 G. max Wm82.a2.v1
Defline:  (1 of 52) PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Genomic Order:  2675
Name:  ? Glyma.07G267500 Secondary Identifier:  ? PAC:30494077
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G267500 0.5kb upstream 0.5kb upstream 2976 true Chr07: 44075462-44078437 Glycine max
Glyma.07G267500 0.5kb upstream 0.5kb upstream 500 false Chr07: 44077938-44078437 Glycine max
Glyma.07G267500 0.5kb downstream 0.5kb downstream 2976 true Chr07: 44074962-44077937 Glycine max
Glyma.07G267500 0.5kb downstream 0.5kb downstream 500 false Chr07: 44074962-44075461 Glycine max
Glyma.07G267500 1.0kb upstream 1.0kb upstream 3476 true Chr07: 44075462-44078937 Glycine max
Glyma.07G267500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 44077938-44078937 Glycine max
Glyma.07G267500 1.0kb downstream 1.0kb downstream 3476 true Chr07: 44074462-44077937 Glycine max
Glyma.07G267500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 44074462-44075461 Glycine max
Glyma.07G267500 2.0kb upstream 2.0kb upstream 4476 true Chr07: 44075462-44079937 Glycine max
Glyma.07G267500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 44077938-44079937 Glycine max
Glyma.07G267500 2.0kb downstream 2.0kb downstream 4476 true Chr07: 44073462-44077937 Glycine max
Glyma.07G267500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 44073462-44075461 Glycine max
Glyma.07G267500 5.0kb upstream 5.0kb upstream 7476 true Chr07: 44075462-44082937 Glycine max
Glyma.07G267500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 44077938-44082937 Glycine max
Glyma.07G267500 5.0kb downstream 5.0kb downstream 7476 true Chr07: 44070462-44077937 Glycine max
Glyma.07G267500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 44070462-44075461 Glycine max
Glyma.07G267500 10.0kb upstream 10.0kb upstream 12476 true Chr07: 44075462-44087937 Glycine max
Glyma.07G267500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 44077938-44087937 Glycine max
Glyma.07G267500 10.0kb downstream 10.0kb downstream 12476 true Chr07: 44065462-44077937 Glycine max
Glyma.07G267500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 44065462-44075461 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307922 5265 Fabidae View MSA
124064149 5270 Rosid View MSA
123753301 5271 Pentapetalae View MSA
122789942 5272 Eudicot View MSA
122043539 5273 Angiosperm View MSA
121344903 5274 Embryophyte View MSA
123380125 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.8456 0.0 34.2717   High
cufflinks 8.19779 0.0 22.1233    
cufflinks 6.4967 0.0 17.7469    
cufflinks 5.65336 0.0 15.6287    
cufflinks 4.22043 0.0 12.0267    
cufflinks 1.8434 0.0 5.86412   Low
cufflinks 3.72682 0.0 10.7926    
cufflinks 5.22809 0.0 14.5487    
cufflinks 3.41773 0.0 9.97036    
cufflinks 5.045        
cufflinks 2.535        
cufflinks 8.537     High  
cufflinks 2.014       Low
cufflinks 2.254       Low
cufflinks 2.516        
cufflinks 19.88     High High
cufflinks 1.975       Low
cufflinks 8.036     High  
cufflinks 10.442     High  
cufflinks 28.481     High High
cufflinks 3.321        
cufflinks 25.05     High High
cufflinks 22.529     High High
cufflinks 3.096        
cufflinks 23.698     High High
cufflinks 2.313        

0 Strain