Gene : Glyma.07G269100 G. max Wm82.a2.v1
Defline:  (1 of 77) PF03000 - NPH3 family (NPH3) Genomic Order:  2691
Name:  ? Glyma.07G269100 Secondary Identifier:  ? PAC:30492206
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G269100 0.5kb upstream 0.5kb upstream 7266 true Chr07: 44221548-44228813 Glycine max
Glyma.07G269100 0.5kb upstream 0.5kb upstream 500 false Chr07: 44221548-44222047 Glycine max
Glyma.07G269100 0.5kb downstream 0.5kb downstream 7266 true Chr07: 44222048-44229313 Glycine max
Glyma.07G269100 0.5kb downstream 0.5kb downstream 500 false Chr07: 44228814-44229313 Glycine max
Glyma.07G269100 1.0kb upstream 1.0kb upstream 7766 true Chr07: 44221048-44228813 Glycine max
Glyma.07G269100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 44221048-44222047 Glycine max
Glyma.07G269100 1.0kb downstream 1.0kb downstream 7766 true Chr07: 44222048-44229813 Glycine max
Glyma.07G269100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 44228814-44229813 Glycine max
Glyma.07G269100 2.0kb upstream 2.0kb upstream 8766 true Chr07: 44220048-44228813 Glycine max
Glyma.07G269100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 44220048-44222047 Glycine max
Glyma.07G269100 2.0kb downstream 2.0kb downstream 8766 true Chr07: 44222048-44230813 Glycine max
Glyma.07G269100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 44228814-44230813 Glycine max
Glyma.07G269100 5.0kb upstream 5.0kb upstream 11766 true Chr07: 44217048-44228813 Glycine max
Glyma.07G269100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 44217048-44222047 Glycine max
Glyma.07G269100 5.0kb downstream 5.0kb downstream 11766 true Chr07: 44222048-44233813 Glycine max
Glyma.07G269100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 44228814-44233813 Glycine max
Glyma.07G269100 10.0kb upstream 10.0kb upstream 16766 true Chr07: 44212048-44228813 Glycine max
Glyma.07G269100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 44212048-44222047 Glycine max
Glyma.07G269100 10.0kb downstream 10.0kb downstream 16766 true Chr07: 44222048-44238813 Glycine max
Glyma.07G269100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 44228814-44238813 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026454 5273 Angiosperm View MSA
122313072 5265 Fabidae View MSA
124067148 5270 Rosid View MSA
123737998 5271 Pentapetalae View MSA
122789015 5272 Eudicot View MSA
121296339 5274 Embryophyte View MSA
123334520 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.56724 0.0 8.15082    
cufflinks 3.07583 0.0 15.8383    
cufflinks 2.02281 0.0 10.5207    
cufflinks 4.69371 0.0 18.9458    
cufflinks 2.98214 0.0 14.0571    
cufflinks 0.947624 0.0 5.86554    
cufflinks 0.583586 0.0 3.30074   Low
cufflinks 15.8928 0.0 66.9653   High
cufflinks 1.90085 0.0 11.3136    
cufflinks 1.324       High
cufflinks 0.168        
cufflinks 0.383        
cufflinks 0.308        
cufflinks 0.337        
cufflinks 0.018     Low Low
cufflinks 0.35        
cufflinks 0.19        
cufflinks 0.47        
cufflinks 0.264        
cufflinks 0.289        
cufflinks 0.177        
cufflinks 0.375        
cufflinks 0.289        
cufflinks 0.135        
cufflinks 0.3        
cufflinks 0.137        

0 Strain