Gene : Glyma.07G270100 G. max Wm82.a2.v1
Defline:  (1 of 1) KOG2664 - Small nuclear RNA activating protein complex - 50kD subunit (SNAP50) Genomic Order:  2701
Name:  ? Glyma.07G270100 Secondary Identifier:  ? PAC:30493881
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G270100 0.5kb upstream 0.5kb upstream 7970 true Chr07: 44280939-44288908 Glycine max
Glyma.07G270100 0.5kb upstream 0.5kb upstream 500 false Chr07: 44288409-44288908 Glycine max
Glyma.07G270100 0.5kb downstream 0.5kb downstream 7970 true Chr07: 44280439-44288408 Glycine max
Glyma.07G270100 0.5kb downstream 0.5kb downstream 500 false Chr07: 44280439-44280938 Glycine max
Glyma.07G270100 1.0kb upstream 1.0kb upstream 8470 true Chr07: 44280939-44289408 Glycine max
Glyma.07G270100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 44288409-44289408 Glycine max
Glyma.07G270100 1.0kb downstream 1.0kb downstream 8470 true Chr07: 44279939-44288408 Glycine max
Glyma.07G270100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 44279939-44280938 Glycine max
Glyma.07G270100 2.0kb upstream 2.0kb upstream 9470 true Chr07: 44280939-44290408 Glycine max
Glyma.07G270100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 44288409-44290408 Glycine max
Glyma.07G270100 2.0kb downstream 2.0kb downstream 9470 true Chr07: 44278939-44288408 Glycine max
Glyma.07G270100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 44278939-44280938 Glycine max
Glyma.07G270100 5.0kb upstream 5.0kb upstream 12470 true Chr07: 44280939-44293408 Glycine max
Glyma.07G270100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 44288409-44293408 Glycine max
Glyma.07G270100 5.0kb downstream 5.0kb downstream 12470 true Chr07: 44275939-44288408 Glycine max
Glyma.07G270100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 44275939-44280938 Glycine max
Glyma.07G270100 10.0kb upstream 10.0kb upstream 17470 true Chr07: 44280939-44298408 Glycine max
Glyma.07G270100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 44288409-44298408 Glycine max
Glyma.07G270100 10.0kb downstream 10.0kb downstream 17470 true Chr07: 44270939-44288408 Glycine max
Glyma.07G270100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 44270939-44280938 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299313 5265 Fabidae View MSA
124050343 5270 Rosid View MSA
123737692 5271 Pentapetalae View MSA
122795479 5272 Eudicot View MSA
122043985 5273 Angiosperm View MSA
121347836 5274 Embryophyte View MSA
123424819 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.67527 0.0 38.2556    
cufflinks 5.42145 0.0 26.8641   Low
cufflinks 14.8237 0.0 71.3729   High
cufflinks 7.45628 0.0 38.6675    
cufflinks 4.94063 0.0 25.3269   Low
cufflinks 12.4649 0.0 57.5149   High
cufflinks 8.0696 0.0 35.6556    
cufflinks 10.8583 0.0 49.2101    
cufflinks 5.98183 0.0 30.5398    
cufflinks 0.247        
cufflinks 0.192       Low
cufflinks 0.527       High
cufflinks 0.287        
cufflinks 0.27        
cufflinks 0.229        
cufflinks 0.214        
cufflinks 0.233        
cufflinks 0.418       High
cufflinks 0.341        
cufflinks 0.328        
cufflinks 0.165       Low
cufflinks 0.315        
cufflinks 0.25        
cufflinks 0.212        
cufflinks 0.312        
cufflinks 0.199        

0 Strain