Gene : Glyma.08G033100 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR32295:SF22 - PROTEIN IQ-DOMAIN 25 Genomic Order:  331
Name:  ? Glyma.08G033100 Secondary Identifier:  ? PAC:30537096
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G033100 0.5kb upstream 0.5kb upstream 3341 true Chr08: 2634444-2637784 Glycine max
Glyma.08G033100 0.5kb upstream 0.5kb upstream 500 false Chr08: 2637285-2637784 Glycine max
Glyma.08G033100 0.5kb downstream 0.5kb downstream 3341 true Chr08: 2633944-2637284 Glycine max
Glyma.08G033100 0.5kb downstream 0.5kb downstream 500 false Chr08: 2633944-2634443 Glycine max
Glyma.08G033100 1.0kb upstream 1.0kb upstream 3841 true Chr08: 2634444-2638284 Glycine max
Glyma.08G033100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 2637285-2638284 Glycine max
Glyma.08G033100 1.0kb downstream 1.0kb downstream 3841 true Chr08: 2633444-2637284 Glycine max
Glyma.08G033100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 2633444-2634443 Glycine max
Glyma.08G033100 2.0kb upstream 2.0kb upstream 4841 true Chr08: 2634444-2639284 Glycine max
Glyma.08G033100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 2637285-2639284 Glycine max
Glyma.08G033100 2.0kb downstream 2.0kb downstream 4841 true Chr08: 2632444-2637284 Glycine max
Glyma.08G033100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 2632444-2634443 Glycine max
Glyma.08G033100 5.0kb upstream 5.0kb upstream 7841 true Chr08: 2634444-2642284 Glycine max
Glyma.08G033100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 2637285-2642284 Glycine max
Glyma.08G033100 5.0kb downstream 5.0kb downstream 7841 true Chr08: 2629444-2637284 Glycine max
Glyma.08G033100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 2629444-2634443 Glycine max
Glyma.08G033100 10.0kb upstream 10.0kb upstream 12841 true Chr08: 2634444-2647284 Glycine max
Glyma.08G033100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 2637285-2647284 Glycine max
Glyma.08G033100 10.0kb downstream 10.0kb downstream 12841 true Chr08: 2624444-2637284 Glycine max
Glyma.08G033100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 2624444-2634443 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314506 5265 Fabidae View MSA
124070715 5270 Rosid View MSA
123748073 5271 Pentapetalae View MSA
122791637 5272 Eudicot View MSA
122049529 5273 Angiosperm View MSA
121311456 5274 Embryophyte View MSA
123348751 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0243766 0.0 0.100898 Low Low
cufflinks 10.7953 0.0 28.816   High
cufflinks 1.46194 0.0 4.72868    
cufflinks 2.84047 0.0 8.37604    
cufflinks 1.14579 0.0 3.83609    
cufflinks 0.665536 0.0 2.35224    
cufflinks 0.247432 0.0 0.927563    
cufflinks 1.07822 0.0 3.6312    
cufflinks 2.37939 0.0 7.19497    
cufflinks 2.045        
cufflinks 0.027     Low Low
cufflinks 5.517       High
cufflinks 0.962        
cufflinks 1.725        
cufflinks 0.02     Low Low
cufflinks 2.486        
cufflinks 0.072       Low
cufflinks 4.356        
cufflinks 8.487     High High
cufflinks 1.6        
cufflinks 0.122        
cufflinks 1.83        
cufflinks 3.197        
cufflinks 0.126        
cufflinks 2.088        
cufflinks 0.122        

0 Strain