Gene : Glyma.08G033700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR21068:SF5 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MIL23-RELATED Genomic Order:  337
Name:  ? Glyma.08G033700 Secondary Identifier:  ? PAC:30540493
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G033700 0.5kb upstream 0.5kb upstream 5209 true Chr08: 2690632-2695840 Glycine max
Glyma.08G033700 0.5kb upstream 0.5kb upstream 500 false Chr08: 2690632-2691131 Glycine max
Glyma.08G033700 0.5kb downstream 0.5kb downstream 5209 true Chr08: 2691132-2696340 Glycine max
Glyma.08G033700 0.5kb downstream 0.5kb downstream 500 false Chr08: 2695841-2696340 Glycine max
Glyma.08G033700 1.0kb upstream 1.0kb upstream 5709 true Chr08: 2690132-2695840 Glycine max
Glyma.08G033700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 2690132-2691131 Glycine max
Glyma.08G033700 1.0kb downstream 1.0kb downstream 5709 true Chr08: 2691132-2696840 Glycine max
Glyma.08G033700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 2695841-2696840 Glycine max
Glyma.08G033700 2.0kb upstream 2.0kb upstream 6709 true Chr08: 2689132-2695840 Glycine max
Glyma.08G033700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 2689132-2691131 Glycine max
Glyma.08G033700 2.0kb downstream 2.0kb downstream 6709 true Chr08: 2691132-2697840 Glycine max
Glyma.08G033700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 2695841-2697840 Glycine max
Glyma.08G033700 5.0kb upstream 5.0kb upstream 9709 true Chr08: 2686132-2695840 Glycine max
Glyma.08G033700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 2686132-2691131 Glycine max
Glyma.08G033700 5.0kb downstream 5.0kb downstream 9709 true Chr08: 2691132-2700840 Glycine max
Glyma.08G033700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 2695841-2700840 Glycine max
Glyma.08G033700 10.0kb upstream 10.0kb upstream 14709 true Chr08: 2681132-2695840 Glycine max
Glyma.08G033700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 2681132-2691131 Glycine max
Glyma.08G033700 10.0kb downstream 10.0kb downstream 14709 true Chr08: 2691132-2705840 Glycine max
Glyma.08G033700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 2695841-2705840 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026413 5273 Angiosperm View MSA
122309272 5265 Fabidae View MSA
124068163 5270 Rosid View MSA
123740247 5271 Pentapetalae View MSA
122787553 5272 Eudicot View MSA
121296318 5274 Embryophyte View MSA
123334500 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.110633 0.0 0.85069 Low Low
cufflinks 1.52699 0.0 7.47404    
cufflinks 0.253002 0.0 1.64367    
cufflinks 0.625347 0.0 4.02072    
cufflinks 0.608314 0.0 4.53918    
cufflinks 0.119261 0.0 0.467159 Low Low
cufflinks 0.719318 0.0 4.13639    
cufflinks 3.97417 0.0 17.6763   High
cufflinks 0.9369 0.0 6.29771    
cufflinks 0.19        
cufflinks 0.17        
cufflinks 0.077     Low  
cufflinks 0.026     Low Low
cufflinks 0.04     Low Low
cufflinks 0.261       High
cufflinks 0.102        
cufflinks 0.136        
cufflinks 0.37       High
cufflinks 0.358       High
cufflinks 0.064     Low  
cufflinks 0.047     Low  
cufflinks 0.076     Low  
cufflinks 0.087     Low  
cufflinks 0.085        
cufflinks 0.062     Low  
cufflinks 0.04     Low Low

0 Strain