Gene : Glyma.08G038300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11266:SF35 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MOB24 Genomic Order:  383
Name:  ? Glyma.08G038300 Secondary Identifier:  ? PAC:30538273
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G038300 0.5kb upstream 0.5kb upstream 2092 true Chr08: 2997237-2999328 Glycine max
Glyma.08G038300 0.5kb upstream 0.5kb upstream 500 false Chr08: 2997237-2997736 Glycine max
Glyma.08G038300 0.5kb downstream 0.5kb downstream 2092 true Chr08: 2997737-2999828 Glycine max
Glyma.08G038300 0.5kb downstream 0.5kb downstream 500 false Chr08: 2999329-2999828 Glycine max
Glyma.08G038300 1.0kb upstream 1.0kb upstream 2592 true Chr08: 2996737-2999328 Glycine max
Glyma.08G038300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 2996737-2997736 Glycine max
Glyma.08G038300 1.0kb downstream 1.0kb downstream 2592 true Chr08: 2997737-3000328 Glycine max
Glyma.08G038300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 2999329-3000328 Glycine max
Glyma.08G038300 2.0kb upstream 2.0kb upstream 3592 true Chr08: 2995737-2999328 Glycine max
Glyma.08G038300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 2995737-2997736 Glycine max
Glyma.08G038300 2.0kb downstream 2.0kb downstream 3592 true Chr08: 2997737-3001328 Glycine max
Glyma.08G038300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 2999329-3001328 Glycine max
Glyma.08G038300 5.0kb upstream 5.0kb upstream 6592 true Chr08: 2992737-2999328 Glycine max
Glyma.08G038300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 2992737-2997736 Glycine max
Glyma.08G038300 5.0kb downstream 5.0kb downstream 6592 true Chr08: 2997737-3004328 Glycine max
Glyma.08G038300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 2999329-3004328 Glycine max
Glyma.08G038300 10.0kb upstream 10.0kb upstream 11592 true Chr08: 2987737-2999328 Glycine max
Glyma.08G038300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 2987737-2997736 Glycine max
Glyma.08G038300 10.0kb downstream 10.0kb downstream 11592 true Chr08: 2997737-3009328 Glycine max
Glyma.08G038300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 2999329-3009328 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122240190 5265 Fabidae Singleton cluster - no MSA
123985295 5270 Rosid Singleton cluster - no MSA
123560734 5271 Pentapetalae Singleton cluster - no MSA
122595531 5272 Eudicot Singleton cluster - no MSA
122051343 5273 Angiosperm View MSA
121350942 5274 Embryophyte View MSA
123428334 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.01964 0.0 3.91188   High
cufflinks 0.218245 0.0 0.890391 Low  
cufflinks 0.0692942 0.0 0.306718 Low Low
cufflinks 0.420826 0.0 1.66998    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0482971 0.0 0.221211 Low Low
cufflinks 0.484552 0.0 1.91205    
cufflinks 0.16164 0.0 0.669097 Low  
cufflinks 0.289        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.424        
cufflinks 0.011     Low Low
cufflinks 0.011     Low Low
cufflinks 0.024     Low  
cufflinks 1.69       High
cufflinks 0.009     Low Low
cufflinks 0.368        
cufflinks 0.508        
cufflinks 0.982        
cufflinks 0.024     Low  
cufflinks 1.792       High
cufflinks 1.47       High
cufflinks 0.025     Low  
cufflinks 2.345       High
cufflinks 0.015     Low Low

0 Strain