Gene : Glyma.08G038400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR33057:SF24 - OVATE FAMILY PROTEIN 8 Genomic Order:  384
Name:  ? Glyma.08G038400 Secondary Identifier:  ? PAC:30536414
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G038400 0.5kb upstream 0.5kb upstream 1920 true Chr08: 3011683-3013602 Glycine max
Glyma.08G038400 0.5kb upstream 0.5kb upstream 500 false Chr08: 3011683-3012182 Glycine max
Glyma.08G038400 0.5kb downstream 0.5kb downstream 1920 true Chr08: 3012183-3014102 Glycine max
Glyma.08G038400 0.5kb downstream 0.5kb downstream 500 false Chr08: 3013603-3014102 Glycine max
Glyma.08G038400 1.0kb upstream 1.0kb upstream 2420 true Chr08: 3011183-3013602 Glycine max
Glyma.08G038400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 3011183-3012182 Glycine max
Glyma.08G038400 1.0kb downstream 1.0kb downstream 2420 true Chr08: 3012183-3014602 Glycine max
Glyma.08G038400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 3013603-3014602 Glycine max
Glyma.08G038400 2.0kb upstream 2.0kb upstream 3420 true Chr08: 3010183-3013602 Glycine max
Glyma.08G038400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 3010183-3012182 Glycine max
Glyma.08G038400 2.0kb downstream 2.0kb downstream 3420 true Chr08: 3012183-3015602 Glycine max
Glyma.08G038400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 3013603-3015602 Glycine max
Glyma.08G038400 5.0kb upstream 5.0kb upstream 6420 true Chr08: 3007183-3013602 Glycine max
Glyma.08G038400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 3007183-3012182 Glycine max
Glyma.08G038400 5.0kb downstream 5.0kb downstream 6420 true Chr08: 3012183-3018602 Glycine max
Glyma.08G038400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 3013603-3018602 Glycine max
Glyma.08G038400 10.0kb upstream 10.0kb upstream 11420 true Chr08: 3002183-3013602 Glycine max
Glyma.08G038400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 3002183-3012182 Glycine max
Glyma.08G038400 10.0kb downstream 10.0kb downstream 11420 true Chr08: 3012183-3023602 Glycine max
Glyma.08G038400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 3013603-3023602 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303425 5265 Fabidae View MSA
124060850 5270 Rosid View MSA
123748591 5271 Pentapetalae View MSA
122791158 5272 Eudicot View MSA
122048787 5273 Angiosperm View MSA
121311113 5274 Embryophyte View MSA
123348456 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.2812 0.0 41.3706   High
cufflinks 12.4281 0.0 34.1425    
cufflinks 3.77338 0.0 12.0749    
cufflinks 2.46785 0.0 8.2947    
cufflinks 11.3288 0.0 31.2468    
cufflinks 3.6873 0.0 11.7299    
cufflinks 0.756129 0.0 2.78968   Low
cufflinks 5.14683 0.0 15.6102    
cufflinks 7.6109 0.0 21.9168    
cufflinks 0.081     Low Low
cufflinks 0.203        
cufflinks 7.895     High High
cufflinks 5.704       High
cufflinks 2.991        
cufflinks 0.053       Low
cufflinks 0.983        
cufflinks 0.034     Low Low
cufflinks 3.433       High
cufflinks 10.599     High High
cufflinks 0.251        
cufflinks 0.153        
cufflinks 0.669        
cufflinks 0.882        
cufflinks 0.092       Low
cufflinks 0.419        
cufflinks 0.382        

0 Strain