Gene : Glyma.08G028100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR24220:SF85 - ABC TRANSPORTER I FAMILY MEMBER 6, CHLOROPLASTIC Genomic Order:  281
Name:  ? Glyma.08G028100 Secondary Identifier:  ? PAC:30540778
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G028100 0.5kb upstream 0.5kb upstream 3018 true Chr08: 2249961-2252978 Glycine max
Glyma.08G028100 0.5kb upstream 0.5kb upstream 500 false Chr08: 2252479-2252978 Glycine max
Glyma.08G028100 0.5kb downstream 0.5kb downstream 3018 true Chr08: 2249461-2252478 Glycine max
Glyma.08G028100 0.5kb downstream 0.5kb downstream 500 false Chr08: 2249461-2249960 Glycine max
Glyma.08G028100 1.0kb upstream 1.0kb upstream 3518 true Chr08: 2249961-2253478 Glycine max
Glyma.08G028100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 2252479-2253478 Glycine max
Glyma.08G028100 1.0kb downstream 1.0kb downstream 3518 true Chr08: 2248961-2252478 Glycine max
Glyma.08G028100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 2248961-2249960 Glycine max
Glyma.08G028100 2.0kb upstream 2.0kb upstream 4518 true Chr08: 2249961-2254478 Glycine max
Glyma.08G028100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 2252479-2254478 Glycine max
Glyma.08G028100 2.0kb downstream 2.0kb downstream 4518 true Chr08: 2247961-2252478 Glycine max
Glyma.08G028100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 2247961-2249960 Glycine max
Glyma.08G028100 5.0kb upstream 5.0kb upstream 7518 true Chr08: 2249961-2257478 Glycine max
Glyma.08G028100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 2252479-2257478 Glycine max
Glyma.08G028100 5.0kb downstream 5.0kb downstream 7518 true Chr08: 2244961-2252478 Glycine max
Glyma.08G028100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 2244961-2249960 Glycine max
Glyma.08G028100 10.0kb upstream 10.0kb upstream 12518 true Chr08: 2249961-2262478 Glycine max
Glyma.08G028100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 2252479-2262478 Glycine max
Glyma.08G028100 10.0kb downstream 10.0kb downstream 12518 true Chr08: 2239961-2252478 Glycine max
Glyma.08G028100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 2239961-2249960 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313549 5265 Fabidae View MSA
124064289 5270 Rosid View MSA
123737216 5271 Pentapetalae View MSA
122791638 5272 Eudicot View MSA
122043551 5273 Angiosperm View MSA
121344782 5274 Embryophyte View MSA
123425394 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.0894 0.0 40.7303    
cufflinks 11.5501 0.0 31.6802    
cufflinks 4.92144 0.0 14.8662   Low
cufflinks 11.0632 0.0 30.4333    
cufflinks 7.44876 0.0 21.2876    
cufflinks 5.91921 0.0 17.4087    
cufflinks 34.2745 0.0 92.0326 High High
cufflinks 5.0272 0.0 15.1265   Low
cufflinks 11.0406 0.0 30.3631    
cufflinks 3.293        
cufflinks 0.902       Low
cufflinks 4.234        
cufflinks 4.232        
cufflinks 4.734        
cufflinks 2.522        
cufflinks 10.023     High High
cufflinks 2.788        
cufflinks 4.948        
cufflinks 9.026     High  
cufflinks 9.178     High  
cufflinks 1.543       Low
cufflinks 9.775     High High
cufflinks 13.387     High High
cufflinks 1.636       Low
cufflinks 9.5     High High
cufflinks 1.955        

0 Strain