Gene : Glyma.08G029600 G. max Wm82.a2.v1
Defline:  (1 of 11) PTHR20889 - PHOSPHATASE, ORPHAN 1, 2 Genomic Order:  296
Name:  ? Glyma.08G029600 Secondary Identifier:  ? PAC:30536506
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G029600 0.5kb upstream 0.5kb upstream 1825 true Chr08: 2369465-2371289 Glycine max
Glyma.08G029600 0.5kb upstream 0.5kb upstream 500 false Chr08: 2370790-2371289 Glycine max
Glyma.08G029600 0.5kb downstream 0.5kb downstream 1825 true Chr08: 2368965-2370789 Glycine max
Glyma.08G029600 0.5kb downstream 0.5kb downstream 500 false Chr08: 2368965-2369464 Glycine max
Glyma.08G029600 1.0kb upstream 1.0kb upstream 2325 true Chr08: 2369465-2371789 Glycine max
Glyma.08G029600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 2370790-2371789 Glycine max
Glyma.08G029600 1.0kb downstream 1.0kb downstream 2325 true Chr08: 2368465-2370789 Glycine max
Glyma.08G029600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 2368465-2369464 Glycine max
Glyma.08G029600 2.0kb upstream 2.0kb upstream 3325 true Chr08: 2369465-2372789 Glycine max
Glyma.08G029600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 2370790-2372789 Glycine max
Glyma.08G029600 2.0kb downstream 2.0kb downstream 3325 true Chr08: 2367465-2370789 Glycine max
Glyma.08G029600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 2367465-2369464 Glycine max
Glyma.08G029600 5.0kb upstream 5.0kb upstream 6325 true Chr08: 2369465-2375789 Glycine max
Glyma.08G029600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 2370790-2375789 Glycine max
Glyma.08G029600 5.0kb downstream 5.0kb downstream 6325 true Chr08: 2364465-2370789 Glycine max
Glyma.08G029600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 2364465-2369464 Glycine max
Glyma.08G029600 10.0kb upstream 10.0kb upstream 11325 true Chr08: 2369465-2380789 Glycine max
Glyma.08G029600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 2370790-2380789 Glycine max
Glyma.08G029600 10.0kb downstream 10.0kb downstream 11325 true Chr08: 2359465-2370789 Glycine max
Glyma.08G029600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 2359465-2369464 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041363 5273 Angiosperm View MSA
122312152 5265 Fabidae View MSA
124062421 5270 Rosid View MSA
123744582 5271 Pentapetalae View MSA
122796230 5272 Eudicot View MSA
121350912 5274 Embryophyte View MSA
123426221 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.8594 0.0 17.9311   Low
cufflinks 12.9565 0.0 35.9752    
cufflinks 5.49578 0.0 16.9505   Low
cufflinks 19.4087 0.0 52.3923    
cufflinks 33.9164 0.0 90.5142 High High
cufflinks 24.5948 0.0 65.8037 High  
cufflinks 10.6331 0.0 30.1179    
cufflinks 21.7083 0.0 58.2887 High  
cufflinks 21.2126 0.0 57.0181 High  
cufflinks 15.422     High High
cufflinks 2.818       Low
cufflinks 4.117        
cufflinks 27.033     High High
cufflinks 44.095     High High
cufflinks 6.866     High  
cufflinks 3.818        
cufflinks 3.17        
cufflinks 5.255        
cufflinks 10.785     High  
cufflinks 3.935        
cufflinks 3.922        
cufflinks 4.853        
cufflinks 5.92        
cufflinks 3.825        
cufflinks 4.206        
cufflinks 4.797        

0 Strain