Gene : Glyma.08G019500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10794:SF58 - CAAX AMINO TERMINAL PROTEASE FAMILY PROTEIN Genomic Order:  195
Name:  ? Glyma.08G019500 Secondary Identifier:  ? PAC:30536168
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G019500 0.5kb upstream 0.5kb upstream 7714 true Chr08: 1582134-1589847 Glycine max
Glyma.08G019500 0.5kb upstream 0.5kb upstream 500 false Chr08: 1589348-1589847 Glycine max
Glyma.08G019500 0.5kb downstream 0.5kb downstream 7714 true Chr08: 1581634-1589347 Glycine max
Glyma.08G019500 0.5kb downstream 0.5kb downstream 500 false Chr08: 1581634-1582133 Glycine max
Glyma.08G019500 1.0kb upstream 1.0kb upstream 8214 true Chr08: 1582134-1590347 Glycine max
Glyma.08G019500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 1589348-1590347 Glycine max
Glyma.08G019500 1.0kb downstream 1.0kb downstream 8214 true Chr08: 1581134-1589347 Glycine max
Glyma.08G019500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 1581134-1582133 Glycine max
Glyma.08G019500 2.0kb upstream 2.0kb upstream 9214 true Chr08: 1582134-1591347 Glycine max
Glyma.08G019500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 1589348-1591347 Glycine max
Glyma.08G019500 2.0kb downstream 2.0kb downstream 9214 true Chr08: 1580134-1589347 Glycine max
Glyma.08G019500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 1580134-1582133 Glycine max
Glyma.08G019500 5.0kb upstream 5.0kb upstream 12214 true Chr08: 1582134-1594347 Glycine max
Glyma.08G019500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 1589348-1594347 Glycine max
Glyma.08G019500 5.0kb downstream 5.0kb downstream 12214 true Chr08: 1577134-1589347 Glycine max
Glyma.08G019500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 1577134-1582133 Glycine max
Glyma.08G019500 10.0kb upstream 10.0kb upstream 17214 true Chr08: 1582134-1599347 Glycine max
Glyma.08G019500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 1589348-1599347 Glycine max
Glyma.08G019500 10.0kb downstream 10.0kb downstream 17214 true Chr08: 1572134-1589347 Glycine max
Glyma.08G019500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 1572134-1582133 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307790 5265 Fabidae View MSA
124068174 5270 Rosid View MSA
123739909 5271 Pentapetalae View MSA
122789492 5272 Eudicot View MSA
122042662 5273 Angiosperm View MSA
121345279 5274 Embryophyte View MSA
123428279 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.9666 0.0 29.9838   High
cufflinks 8.64003 0.0 24.0475    
cufflinks 10.8331 0.0 29.5562   High
cufflinks 11.0137 0.0 30.0754   High
cufflinks 9.45477 0.0 26.1378    
cufflinks 8.53904 0.0 23.7869    
cufflinks 6.86173 0.0 19.5987   Low
cufflinks 8.27008 0.0 23.1062    
cufflinks 8.94526 0.0 24.8111    
cufflinks 1.011       Low
cufflinks 2.939       High
cufflinks 2.114        
cufflinks 1.649        
cufflinks 1.3       Low
cufflinks 2.353        
cufflinks 1.783        
cufflinks 2.262        
cufflinks 2.083        
cufflinks 2.115        
cufflinks 2.003        
cufflinks 3.619       High
cufflinks 2.205        
cufflinks 2.089        
cufflinks 2.82        
cufflinks 1.778        
cufflinks 3.234       High

0 Strain