Gene : Glyma.08G019800 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR31827:SF14 - F22C12.10 Genomic Order:  198
Name:  ? Glyma.08G019800 Secondary Identifier:  ? PAC:30540773
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Ontology Annotation Displayer

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Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G019800 0.5kb upstream 0.5kb upstream 5566 true Chr08: 1613128-1618693 Glycine max
Glyma.08G019800 0.5kb upstream 0.5kb upstream 500 false Chr08: 1618194-1618693 Glycine max
Glyma.08G019800 0.5kb downstream 0.5kb downstream 5566 true Chr08: 1612628-1618193 Glycine max
Glyma.08G019800 0.5kb downstream 0.5kb downstream 500 false Chr08: 1612628-1613127 Glycine max
Glyma.08G019800 1.0kb upstream 1.0kb upstream 6066 true Chr08: 1613128-1619193 Glycine max
Glyma.08G019800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 1618194-1619193 Glycine max
Glyma.08G019800 1.0kb downstream 1.0kb downstream 6066 true Chr08: 1612128-1618193 Glycine max
Glyma.08G019800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 1612128-1613127 Glycine max
Glyma.08G019800 2.0kb upstream 2.0kb upstream 7066 true Chr08: 1613128-1620193 Glycine max
Glyma.08G019800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 1618194-1620193 Glycine max
Glyma.08G019800 2.0kb downstream 2.0kb downstream 7066 true Chr08: 1611128-1618193 Glycine max
Glyma.08G019800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 1611128-1613127 Glycine max
Glyma.08G019800 5.0kb upstream 5.0kb upstream 10066 true Chr08: 1613128-1623193 Glycine max
Glyma.08G019800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 1618194-1623193 Glycine max
Glyma.08G019800 5.0kb downstream 5.0kb downstream 10066 true Chr08: 1608128-1618193 Glycine max
Glyma.08G019800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 1608128-1613127 Glycine max
Glyma.08G019800 10.0kb upstream 10.0kb upstream 15066 true Chr08: 1613128-1628193 Glycine max
Glyma.08G019800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 1618194-1628193 Glycine max
Glyma.08G019800 10.0kb downstream 10.0kb downstream 15066 true Chr08: 1603128-1618193 Glycine max
Glyma.08G019800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 1603128-1613127 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308879 5265 Fabidae View MSA
124063644 5270 Rosid View MSA
123750482 5271 Pentapetalae View MSA
122790555 5272 Eudicot View MSA
122043737 5273 Angiosperm View MSA
121310180 5274 Embryophyte View MSA
123426398 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.2919 0.0 39.7306    
cufflinks 6.86898 0.0 23.8545   Low
cufflinks 44.0198 0.0 210.519 High High
cufflinks 13.3077 0.0 52.4774    
cufflinks 9.65586 0.0 37.0577    
cufflinks 9.5725 0.0 36.6234    
cufflinks 17.1331 0.0 67.9265    
cufflinks 9.10324 0.0 35.21    
cufflinks 10.8074 0.0 41.9481    
cufflinks 1.657       Low
cufflinks 4.282        
cufflinks 8.511     High High
cufflinks 2.087        
cufflinks 2.094        
cufflinks 4.014        
cufflinks 4.45        
cufflinks 1.663       Low
cufflinks 4.488        
cufflinks 2.619        
cufflinks 3.76        
cufflinks 5.178       High
cufflinks 2.911        
cufflinks 2.245        
cufflinks 3.845        
cufflinks 4.69        
cufflinks 2.29        

0 Strain