Gene : Glyma.08G019900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21495//PTHR21495:SF49 - NUCLEOPORIN-RELATED Genomic Order:  199
Name:  ? Glyma.08G019900 Secondary Identifier:  ? PAC:30539528
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G019900 0.5kb upstream 0.5kb upstream 1502 true Chr08: 1632985-1634486 Glycine max
Glyma.08G019900 0.5kb upstream 0.5kb upstream 500 false Chr08: 1633987-1634486 Glycine max
Glyma.08G019900 0.5kb downstream 0.5kb downstream 1502 true Chr08: 1632485-1633986 Glycine max
Glyma.08G019900 0.5kb downstream 0.5kb downstream 500 false Chr08: 1632485-1632984 Glycine max
Glyma.08G019900 1.0kb upstream 1.0kb upstream 2002 true Chr08: 1632985-1634986 Glycine max
Glyma.08G019900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 1633987-1634986 Glycine max
Glyma.08G019900 1.0kb downstream 1.0kb downstream 2002 true Chr08: 1631985-1633986 Glycine max
Glyma.08G019900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 1631985-1632984 Glycine max
Glyma.08G019900 2.0kb upstream 2.0kb upstream 3002 true Chr08: 1632985-1635986 Glycine max
Glyma.08G019900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 1633987-1635986 Glycine max
Glyma.08G019900 2.0kb downstream 2.0kb downstream 3002 true Chr08: 1630985-1633986 Glycine max
Glyma.08G019900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 1630985-1632984 Glycine max
Glyma.08G019900 5.0kb upstream 5.0kb upstream 6002 true Chr08: 1632985-1638986 Glycine max
Glyma.08G019900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 1633987-1638986 Glycine max
Glyma.08G019900 5.0kb downstream 5.0kb downstream 6002 true Chr08: 1627985-1633986 Glycine max
Glyma.08G019900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 1627985-1632984 Glycine max
Glyma.08G019900 10.0kb upstream 10.0kb upstream 11002 true Chr08: 1632985-1643986 Glycine max
Glyma.08G019900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 1633987-1643986 Glycine max
Glyma.08G019900 10.0kb downstream 10.0kb downstream 11002 true Chr08: 1622985-1633986 Glycine max
Glyma.08G019900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 1622985-1632984 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302483 5265 Fabidae View MSA
124071595 5270 Rosid View MSA
123748971 5271 Pentapetalae View MSA
122793994 5272 Eudicot View MSA
122050560 5273 Angiosperm View MSA
121351582 5274 Embryophyte View MSA
123382236 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0535836 0.0 0.228346 Low Low
cufflinks 0.210961 0.0 0.836581 Low  
cufflinks 0.287813 0.0 1.12804    
cufflinks 0.27989 0.0 1.09863    
cufflinks 10.4805 0.0 30.4836    
cufflinks 6.04896 0.0 18.9846    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 8.88746 0.0 26.488    
cufflinks 15.9747 0.0 44.3541   High
cufflinks 16.156     High High
cufflinks 2.063        
cufflinks 0.199        
cufflinks 21.651     High High
cufflinks 5.541        
cufflinks 0.788        
cufflinks 0.194        
cufflinks 11.673     High High
cufflinks 0.152        
cufflinks 0.382        
cufflinks 0.034     Low Low
cufflinks 4.741        
cufflinks 0.101       Low
cufflinks 0.069     Low Low
cufflinks 3.256        
cufflinks 0.153        
cufflinks 4.56        

0 Strain