Gene : Glyma.08G021500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR32285:SF40 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 23-RELATED Genomic Order:  215
Name:  ? Glyma.08G021500 Secondary Identifier:  ? PAC:30538049
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G021500 0.5kb upstream 0.5kb upstream 3389 true Chr08: 1741323-1744711 Glycine max
Glyma.08G021500 0.5kb upstream 0.5kb upstream 500 false Chr08: 1741323-1741822 Glycine max
Glyma.08G021500 0.5kb downstream 0.5kb downstream 3389 true Chr08: 1741823-1745211 Glycine max
Glyma.08G021500 0.5kb downstream 0.5kb downstream 500 false Chr08: 1744712-1745211 Glycine max
Glyma.08G021500 1.0kb upstream 1.0kb upstream 3889 true Chr08: 1740823-1744711 Glycine max
Glyma.08G021500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 1740823-1741822 Glycine max
Glyma.08G021500 1.0kb downstream 1.0kb downstream 3889 true Chr08: 1741823-1745711 Glycine max
Glyma.08G021500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 1744712-1745711 Glycine max
Glyma.08G021500 2.0kb upstream 2.0kb upstream 4889 true Chr08: 1739823-1744711 Glycine max
Glyma.08G021500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 1739823-1741822 Glycine max
Glyma.08G021500 2.0kb downstream 2.0kb downstream 4889 true Chr08: 1741823-1746711 Glycine max
Glyma.08G021500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 1744712-1746711 Glycine max
Glyma.08G021500 5.0kb upstream 5.0kb upstream 7889 true Chr08: 1736823-1744711 Glycine max
Glyma.08G021500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 1736823-1741822 Glycine max
Glyma.08G021500 5.0kb downstream 5.0kb downstream 7889 true Chr08: 1741823-1749711 Glycine max
Glyma.08G021500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 1744712-1749711 Glycine max
Glyma.08G021500 10.0kb upstream 10.0kb upstream 12889 true Chr08: 1731823-1744711 Glycine max
Glyma.08G021500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 1731823-1741822 Glycine max
Glyma.08G021500 10.0kb downstream 10.0kb downstream 12889 true Chr08: 1741823-1754711 Glycine max
Glyma.08G021500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 1744712-1754711 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302565 5265 Fabidae View MSA
124065212 5270 Rosid View MSA
123736639 5271 Pentapetalae View MSA
122792131 5272 Eudicot View MSA
122046585 5273 Angiosperm View MSA
121348167 5274 Embryophyte View MSA
123380754 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.44595 0.0 1.65604   Low
cufflinks 1.66989 0.0 5.60032    
cufflinks 0.311841 0.0 1.17588   Low
cufflinks 1.15241 0.0 4.0157    
cufflinks 3.68806 0.0 11.1063   High
cufflinks 2.04592 0.0 6.67621    
cufflinks 1.87962 0.0 6.22972    
cufflinks 2.4358 0.0 7.75517    
cufflinks 1.91532 0.0 6.30864    
cufflinks 3.551       High
cufflinks 0.046     Low Low
cufflinks 0.594        
cufflinks 4.295       High
cufflinks 5.519       High
cufflinks 0.046     Low Low
cufflinks 0.869        
cufflinks 0.349        
cufflinks 1.289        
cufflinks 1.417        
cufflinks 0.641        
cufflinks 0.149        
cufflinks 0.841        
cufflinks 1.696        
cufflinks 0.057     Low Low
cufflinks 0.659        
cufflinks 0.289        

0 Strain