Gene : Glyma.08G025100 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10791:SF41 - BIDIRECTIONAL SUGAR TRANSPORTER SWEET6-RELATED Genomic Order:  251
Name:  ? Glyma.08G025100 Secondary Identifier:  ? PAC:30538421
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G025100 0.5kb upstream 0.5kb upstream 3986 true Chr08: 1981178-1985163 Glycine max
Glyma.08G025100 0.5kb upstream 0.5kb upstream 500 false Chr08: 1984664-1985163 Glycine max
Glyma.08G025100 0.5kb downstream 0.5kb downstream 3986 true Chr08: 1980678-1984663 Glycine max
Glyma.08G025100 0.5kb downstream 0.5kb downstream 500 false Chr08: 1980678-1981177 Glycine max
Glyma.08G025100 1.0kb upstream 1.0kb upstream 4486 true Chr08: 1981178-1985663 Glycine max
Glyma.08G025100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 1984664-1985663 Glycine max
Glyma.08G025100 1.0kb downstream 1.0kb downstream 4486 true Chr08: 1980178-1984663 Glycine max
Glyma.08G025100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 1980178-1981177 Glycine max
Glyma.08G025100 2.0kb upstream 2.0kb upstream 5486 true Chr08: 1981178-1986663 Glycine max
Glyma.08G025100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 1984664-1986663 Glycine max
Glyma.08G025100 2.0kb downstream 2.0kb downstream 5486 true Chr08: 1979178-1984663 Glycine max
Glyma.08G025100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 1979178-1981177 Glycine max
Glyma.08G025100 5.0kb upstream 5.0kb upstream 8486 true Chr08: 1981178-1989663 Glycine max
Glyma.08G025100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 1984664-1989663 Glycine max
Glyma.08G025100 5.0kb downstream 5.0kb downstream 8486 true Chr08: 1976178-1984663 Glycine max
Glyma.08G025100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 1976178-1981177 Glycine max
Glyma.08G025100 10.0kb upstream 10.0kb upstream 13486 true Chr08: 1981178-1994663 Glycine max
Glyma.08G025100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 1984664-1994663 Glycine max
Glyma.08G025100 10.0kb downstream 10.0kb downstream 13486 true Chr08: 1971178-1984663 Glycine max
Glyma.08G025100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 1971178-1981177 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310314 5265 Fabidae View MSA
124069750 5270 Rosid View MSA
123746356 5271 Pentapetalae View MSA
122795008 5272 Eudicot View MSA
122042373 5273 Angiosperm View MSA
121350795 5274 Embryophyte View MSA
123428840 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0206409 0.0 0.0933488 Low Low
cufflinks 0.397763 0.0 1.52095    
cufflinks 28.0032 0.0 74.7215 High High
cufflinks 8.40631 0.0 24.2993    
cufflinks 0.103834 0.0 0.418419 Low  
cufflinks 0.189141 0.0 0.745232 Low  
cufflinks 37.4189 0.0 100.076 High High
cufflinks 0.379419 0.0 1.45272    
cufflinks 0.100872 0.0 0.406805 Low  
cufflinks 0.013     Low  
cufflinks 0.011     Low  
cufflinks 8.706     High High
cufflinks 0.032     Low  
cufflinks 0.114        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.07     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 17.803     High High
cufflinks 0.043     Low  
cufflinks 0.163        
cufflinks 0.012     Low  
cufflinks 0.124        
cufflinks 0.021     Low  
cufflinks 0.011     Low  
cufflinks 0.077     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain