Gene : Glyma.08G013500 G. max Wm82.a2.v1
Defline:  (1 of 2) 4.3.1.17 - L-serine ammonia-lyase / Serine deaminase Genomic Order:  135
Name:  ? Glyma.08G013500 Secondary Identifier:  ? PAC:30541109
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY0-1535 Glycine max pathologic  
Gmax PWY-6196 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G013500 0.5kb upstream 0.5kb upstream 2694 true Chr08: 1055229-1057922 Glycine max
Glyma.08G013500 0.5kb upstream 0.5kb upstream 500 false Chr08: 1057423-1057922 Glycine max
Glyma.08G013500 0.5kb downstream 0.5kb downstream 2694 true Chr08: 1054729-1057422 Glycine max
Glyma.08G013500 0.5kb downstream 0.5kb downstream 500 false Chr08: 1054729-1055228 Glycine max
Glyma.08G013500 1.0kb upstream 1.0kb upstream 3194 true Chr08: 1055229-1058422 Glycine max
Glyma.08G013500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 1057423-1058422 Glycine max
Glyma.08G013500 1.0kb downstream 1.0kb downstream 3194 true Chr08: 1054229-1057422 Glycine max
Glyma.08G013500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 1054229-1055228 Glycine max
Glyma.08G013500 2.0kb upstream 2.0kb upstream 4194 true Chr08: 1055229-1059422 Glycine max
Glyma.08G013500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 1057423-1059422 Glycine max
Glyma.08G013500 2.0kb downstream 2.0kb downstream 4194 true Chr08: 1053229-1057422 Glycine max
Glyma.08G013500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 1053229-1055228 Glycine max
Glyma.08G013500 5.0kb upstream 5.0kb upstream 7194 true Chr08: 1055229-1062422 Glycine max
Glyma.08G013500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 1057423-1062422 Glycine max
Glyma.08G013500 5.0kb downstream 5.0kb downstream 7194 true Chr08: 1050229-1057422 Glycine max
Glyma.08G013500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 1050229-1055228 Glycine max
Glyma.08G013500 10.0kb upstream 10.0kb upstream 12194 true Chr08: 1055229-1067422 Glycine max
Glyma.08G013500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 1057423-1067422 Glycine max
Glyma.08G013500 10.0kb downstream 10.0kb downstream 12194 true Chr08: 1045229-1057422 Glycine max
Glyma.08G013500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 1045229-1055228 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306143 5265 Fabidae View MSA
124063016 5270 Rosid View MSA
123740366 5271 Pentapetalae View MSA
122789012 5272 Eudicot View MSA
122046421 5273 Angiosperm View MSA
121344246 5274 Embryophyte View MSA
123427671 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.739676 0.0 2.75051    
cufflinks 1.02711 0.0 3.75522    
cufflinks 0.667038 0.0 2.48882    
cufflinks 1.02881 0.0 3.75674    
cufflinks 0.853313 0.0 3.15001    
cufflinks 0.492002 0.0 1.86328   Low
cufflinks 1.25805 0.0 4.53992   High
cufflinks 0.831784 0.0 3.07402    
cufflinks 0.760604 0.0 2.82466    
cufflinks 0.685        
cufflinks 0.528        
cufflinks 0.75        
cufflinks 0.53        
cufflinks 0.596        
cufflinks 0.366       Low
cufflinks 1.392        
cufflinks 0.46       Low
cufflinks 1.07        
cufflinks 1.163        
cufflinks 1.534       High
cufflinks 0.688        
cufflinks 1.712       High
cufflinks 1.866       High
cufflinks 0.535        
cufflinks 1.704       High
cufflinks 0.512        

0 Strain