Gene : Glyma.08G013700 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11260:SF220 - GST-CONTAINING FLYWCH ZINC-FINGER PROTEIN Genomic Order:  137
Name:  ? Glyma.08G013700 Secondary Identifier:  ? PAC:30539483
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6842 Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G013700 0.5kb upstream 0.5kb upstream 3868 true Chr08: 1070653-1074520 Glycine max
Glyma.08G013700 0.5kb upstream 0.5kb upstream 500 false Chr08: 1074021-1074520 Glycine max
Glyma.08G013700 0.5kb downstream 0.5kb downstream 3868 true Chr08: 1070153-1074020 Glycine max
Glyma.08G013700 0.5kb downstream 0.5kb downstream 500 false Chr08: 1070153-1070652 Glycine max
Glyma.08G013700 1.0kb upstream 1.0kb upstream 4368 true Chr08: 1070653-1075020 Glycine max
Glyma.08G013700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 1074021-1075020 Glycine max
Glyma.08G013700 1.0kb downstream 1.0kb downstream 4368 true Chr08: 1069653-1074020 Glycine max
Glyma.08G013700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 1069653-1070652 Glycine max
Glyma.08G013700 2.0kb upstream 2.0kb upstream 5368 true Chr08: 1070653-1076020 Glycine max
Glyma.08G013700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 1074021-1076020 Glycine max
Glyma.08G013700 2.0kb downstream 2.0kb downstream 5368 true Chr08: 1068653-1074020 Glycine max
Glyma.08G013700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 1068653-1070652 Glycine max
Glyma.08G013700 5.0kb upstream 5.0kb upstream 8368 true Chr08: 1070653-1079020 Glycine max
Glyma.08G013700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 1074021-1079020 Glycine max
Glyma.08G013700 5.0kb downstream 5.0kb downstream 8368 true Chr08: 1065653-1074020 Glycine max
Glyma.08G013700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 1065653-1070652 Glycine max
Glyma.08G013700 10.0kb upstream 10.0kb upstream 13368 true Chr08: 1070653-1084020 Glycine max
Glyma.08G013700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 1074021-1084020 Glycine max
Glyma.08G013700 10.0kb downstream 10.0kb downstream 13368 true Chr08: 1060653-1074020 Glycine max
Glyma.08G013700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 1060653-1070652 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040873 5273 Angiosperm View MSA
122248682 5265 Fabidae Singleton cluster - no MSA
123992229 5270 Rosid Singleton cluster - no MSA
123751759 5271 Pentapetalae View MSA
122789366 5272 Eudicot View MSA
121350998 5274 Embryophyte View MSA
123428193 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.11101 0.0 4.01472   High
cufflinks 0.407681 0.0 1.54941    
cufflinks 0.18923 0.0 0.741656 Low  
cufflinks 0.0390809 0.0 0.16546 Low Low
cufflinks 0.722763 0.0 2.67682    
cufflinks 0.274052 0.0 1.06028 Low  
cufflinks 0.62409 0.0 2.32962    
cufflinks 0.640821 0.0 2.38387    
cufflinks 0.638451 0.0 2.37751    
cufflinks 0.114        
cufflinks 0.212        
cufflinks 0.185        
cufflinks 0.375       High
cufflinks 0.437       High
cufflinks 0.039     Low Low
cufflinks 0.232        
cufflinks 0.114        
cufflinks 0.302        
cufflinks 0.094     Low Low
cufflinks 0.263        
cufflinks 0.215        
cufflinks 0.283        
cufflinks 0.137        
cufflinks 0.218        
cufflinks 0.203        
cufflinks 0.128        

0 Strain