Gene : Glyma.08G015200 G. max Wm82.a2.v1
Defline:  (1 of 2) 6.3.2.37 - UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--D-lysine ligase / UDP-MurNAc-L-Ala-D-Glu:D-Lys ligase Genomic Order:  152
Name:  ? Glyma.08G015200 Secondary Identifier:  ? PAC:30540484
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G015200 0.5kb upstream 0.5kb upstream 4471 true Chr08: 1192053-1196523 Glycine max
Glyma.08G015200 0.5kb upstream 0.5kb upstream 500 false Chr08: 1192053-1192552 Glycine max
Glyma.08G015200 0.5kb downstream 0.5kb downstream 4471 true Chr08: 1192553-1197023 Glycine max
Glyma.08G015200 0.5kb downstream 0.5kb downstream 500 false Chr08: 1196524-1197023 Glycine max
Glyma.08G015200 1.0kb upstream 1.0kb upstream 4971 true Chr08: 1191553-1196523 Glycine max
Glyma.08G015200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 1191553-1192552 Glycine max
Glyma.08G015200 1.0kb downstream 1.0kb downstream 4971 true Chr08: 1192553-1197523 Glycine max
Glyma.08G015200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 1196524-1197523 Glycine max
Glyma.08G015200 2.0kb upstream 2.0kb upstream 5971 true Chr08: 1190553-1196523 Glycine max
Glyma.08G015200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 1190553-1192552 Glycine max
Glyma.08G015200 2.0kb downstream 2.0kb downstream 5971 true Chr08: 1192553-1198523 Glycine max
Glyma.08G015200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 1196524-1198523 Glycine max
Glyma.08G015200 5.0kb upstream 5.0kb upstream 8971 true Chr08: 1187553-1196523 Glycine max
Glyma.08G015200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 1187553-1192552 Glycine max
Glyma.08G015200 5.0kb downstream 5.0kb downstream 8971 true Chr08: 1192553-1201523 Glycine max
Glyma.08G015200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 1196524-1201523 Glycine max
Glyma.08G015200 10.0kb upstream 10.0kb upstream 13971 true Chr08: 1182553-1196523 Glycine max
Glyma.08G015200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 1182553-1192552 Glycine max
Glyma.08G015200 10.0kb downstream 10.0kb downstream 13971 true Chr08: 1192553-1206523 Glycine max
Glyma.08G015200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 1196524-1206523 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307109 5265 Fabidae View MSA
124060443 5270 Rosid View MSA
123746707 5271 Pentapetalae View MSA
122792589 5272 Eudicot View MSA
122042880 5273 Angiosperm View MSA
121344951 5274 Embryophyte View MSA
123428207 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.0915 0.0 46.28   High
cufflinks 6.53782 0.0 17.6288    
cufflinks 4.25339 0.0 11.802    
cufflinks 6.1958 0.0 16.7495    
cufflinks 6.63491 0.0 17.8517    
cufflinks 2.15045 0.0 6.44509   Low
cufflinks 6.30944 0.0 17.0253    
cufflinks 6.95423 0.0 18.6997    
cufflinks 4.46926 0.0 12.3316    
cufflinks 5.972        
cufflinks 1.731       Low
cufflinks 6.386        
cufflinks 3.977        
cufflinks 5.17        
cufflinks 5.436     High  
cufflinks 14.781     High High
cufflinks 2.864       Low
cufflinks 7.198        
cufflinks 10.826     High  
cufflinks 12.652     High High
cufflinks 3.03        
cufflinks 14.338     High High
cufflinks 13.519     High High
cufflinks 2.037       Low
cufflinks 13.578     High High
cufflinks 2.768       Low

0 Strain