Gene : Glyma.08G015700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR14499:SF11 - PROTEIN VM106R.1 Genomic Order:  157
Name:  ? Glyma.08G015700 Secondary Identifier:  ? PAC:30538907
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G015700 0.5kb upstream 0.5kb upstream 2900 true Chr08: 1239656-1242555 Glycine max
Glyma.08G015700 0.5kb upstream 0.5kb upstream 500 false Chr08: 1242056-1242555 Glycine max
Glyma.08G015700 0.5kb downstream 0.5kb downstream 2900 true Chr08: 1239156-1242055 Glycine max
Glyma.08G015700 0.5kb downstream 0.5kb downstream 500 false Chr08: 1239156-1239655 Glycine max
Glyma.08G015700 1.0kb upstream 1.0kb upstream 3400 true Chr08: 1239656-1243055 Glycine max
Glyma.08G015700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 1242056-1243055 Glycine max
Glyma.08G015700 1.0kb downstream 1.0kb downstream 3400 true Chr08: 1238656-1242055 Glycine max
Glyma.08G015700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 1238656-1239655 Glycine max
Glyma.08G015700 2.0kb upstream 2.0kb upstream 4400 true Chr08: 1239656-1244055 Glycine max
Glyma.08G015700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 1242056-1244055 Glycine max
Glyma.08G015700 2.0kb downstream 2.0kb downstream 4400 true Chr08: 1237656-1242055 Glycine max
Glyma.08G015700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 1237656-1239655 Glycine max
Glyma.08G015700 5.0kb upstream 5.0kb upstream 7400 true Chr08: 1239656-1247055 Glycine max
Glyma.08G015700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 1242056-1247055 Glycine max
Glyma.08G015700 5.0kb downstream 5.0kb downstream 7400 true Chr08: 1234656-1242055 Glycine max
Glyma.08G015700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 1234656-1239655 Glycine max
Glyma.08G015700 10.0kb upstream 10.0kb upstream 12400 true Chr08: 1239656-1252055 Glycine max
Glyma.08G015700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 1242056-1252055 Glycine max
Glyma.08G015700 10.0kb downstream 10.0kb downstream 12400 true Chr08: 1229656-1242055 Glycine max
Glyma.08G015700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 1229656-1239655 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299845 5265 Fabidae View MSA
124060798 5270 Rosid View MSA
123737631 5271 Pentapetalae View MSA
122791240 5272 Eudicot View MSA
122042173 5273 Angiosperm View MSA
121348328 5274 Embryophyte View MSA
123380822 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.5434 0.0 44.2414   High
cufflinks 2.45697 0.0 7.55449    
cufflinks 1.55945 0.0 5.12745    
cufflinks 1.534 0.0 5.0332    
cufflinks 3.74578 0.0 10.8074    
cufflinks 10.8042 0.0 28.8825   High
cufflinks 1.03968 0.0 3.56633   Low
cufflinks 1.69673 0.0 5.48877    
cufflinks 2.39178 0.0 7.35591    
cufflinks 9.718     High  
cufflinks 32.867     High High
cufflinks 2.904        
cufflinks 8.596     High  
cufflinks 2.85        
cufflinks 25.459     High  
cufflinks 3.117        
cufflinks 42.458     High High
cufflinks 3.214        
cufflinks 2.035        
cufflinks 1.098       Low
cufflinks 32.638     High High
cufflinks 3.047        
cufflinks 4.029        
cufflinks 34.545     High High
cufflinks 1.442       Low
cufflinks 37.471     High High

0 Strain