Gene : Glyma.08G017700 G. max Wm82.a2.v1
Defline:  (1 of 14) PF05633 - Protein of unknown function (DUF793) (DUF793) Genomic Order:  177
Name:  ? Glyma.08G017700 Secondary Identifier:  ? PAC:30539593
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G017700 0.5kb upstream 0.5kb upstream 2777 true Chr08: 1428908-1431684 Glycine max
Glyma.08G017700 0.5kb upstream 0.5kb upstream 500 false Chr08: 1428908-1429407 Glycine max
Glyma.08G017700 0.5kb downstream 0.5kb downstream 2777 true Chr08: 1429408-1432184 Glycine max
Glyma.08G017700 0.5kb downstream 0.5kb downstream 500 false Chr08: 1431685-1432184 Glycine max
Glyma.08G017700 1.0kb upstream 1.0kb upstream 3277 true Chr08: 1428408-1431684 Glycine max
Glyma.08G017700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 1428408-1429407 Glycine max
Glyma.08G017700 1.0kb downstream 1.0kb downstream 3277 true Chr08: 1429408-1432684 Glycine max
Glyma.08G017700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 1431685-1432684 Glycine max
Glyma.08G017700 2.0kb upstream 2.0kb upstream 4277 true Chr08: 1427408-1431684 Glycine max
Glyma.08G017700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 1427408-1429407 Glycine max
Glyma.08G017700 2.0kb downstream 2.0kb downstream 4277 true Chr08: 1429408-1433684 Glycine max
Glyma.08G017700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 1431685-1433684 Glycine max
Glyma.08G017700 5.0kb upstream 5.0kb upstream 7277 true Chr08: 1424408-1431684 Glycine max
Glyma.08G017700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 1424408-1429407 Glycine max
Glyma.08G017700 5.0kb downstream 5.0kb downstream 7277 true Chr08: 1429408-1436684 Glycine max
Glyma.08G017700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 1431685-1436684 Glycine max
Glyma.08G017700 10.0kb upstream 10.0kb upstream 12277 true Chr08: 1419408-1431684 Glycine max
Glyma.08G017700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 1419408-1429407 Glycine max
Glyma.08G017700 10.0kb downstream 10.0kb downstream 12277 true Chr08: 1429408-1441684 Glycine max
Glyma.08G017700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 1431685-1441684 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306784 5265 Fabidae View MSA
124065163 5270 Rosid View MSA
123741032 5271 Pentapetalae View MSA
122770001 5272 Eudicot View MSA
122049530 5273 Angiosperm View MSA
121311457 5274 Embryophyte View MSA
123348752 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.99856 0.0 3.47416    
cufflinks 0.957305 0.0 3.354    
cufflinks 3.19014 0.0 9.63934    
cufflinks 0.973374 0.0 3.39972    
cufflinks 3.65425 0.0 10.6798    
cufflinks 23.3162 0.0 62.918 High High
cufflinks 0.833036 0.0 2.93843    
cufflinks 1.10942 0.0 3.8318    
cufflinks 2.05331 0.0 6.54979    
cufflinks 0.445        
cufflinks 0.501        
cufflinks 0.423        
cufflinks 0.795       High
cufflinks 0.625        
cufflinks 0.307       Low
cufflinks 0.726        
cufflinks 0.476        
cufflinks 0.76        
cufflinks 0.73        
cufflinks 0.374        
cufflinks 0.22       Low
cufflinks 0.546        
cufflinks 0.805       High
cufflinks 0.78       High
cufflinks 0.592        
cufflinks 0.412        

0 Strain