Gene : Glyma.08G018500 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11668:SF280 - SERINE/THREONINE-PROTEIN PHOSPHATASE PP1 ISOZYME 7 Genomic Order:  185
Name:  ? Glyma.08G018500 Secondary Identifier:  ? PAC:30537088
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Ontology Annotation Displayer

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Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G018500 0.5kb upstream 0.5kb upstream 4982 true Chr08: 1498348-1503329 Glycine max
Glyma.08G018500 0.5kb upstream 0.5kb upstream 500 false Chr08: 1502830-1503329 Glycine max
Glyma.08G018500 0.5kb downstream 0.5kb downstream 4982 true Chr08: 1497848-1502829 Glycine max
Glyma.08G018500 0.5kb downstream 0.5kb downstream 500 false Chr08: 1497848-1498347 Glycine max
Glyma.08G018500 1.0kb upstream 1.0kb upstream 5482 true Chr08: 1498348-1503829 Glycine max
Glyma.08G018500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 1502830-1503829 Glycine max
Glyma.08G018500 1.0kb downstream 1.0kb downstream 5482 true Chr08: 1497348-1502829 Glycine max
Glyma.08G018500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 1497348-1498347 Glycine max
Glyma.08G018500 2.0kb upstream 2.0kb upstream 6482 true Chr08: 1498348-1504829 Glycine max
Glyma.08G018500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 1502830-1504829 Glycine max
Glyma.08G018500 2.0kb downstream 2.0kb downstream 6482 true Chr08: 1496348-1502829 Glycine max
Glyma.08G018500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 1496348-1498347 Glycine max
Glyma.08G018500 5.0kb upstream 5.0kb upstream 9482 true Chr08: 1498348-1507829 Glycine max
Glyma.08G018500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 1502830-1507829 Glycine max
Glyma.08G018500 5.0kb downstream 5.0kb downstream 9482 true Chr08: 1493348-1502829 Glycine max
Glyma.08G018500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 1493348-1498347 Glycine max
Glyma.08G018500 10.0kb upstream 10.0kb upstream 14482 true Chr08: 1498348-1512829 Glycine max
Glyma.08G018500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 1502830-1512829 Glycine max
Glyma.08G018500 10.0kb downstream 10.0kb downstream 14482 true Chr08: 1488348-1502829 Glycine max
Glyma.08G018500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 1488348-1498347 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305022 5265 Fabidae View MSA
124061068 5270 Rosid View MSA
123743597 5271 Pentapetalae View MSA
122792563 5272 Eudicot View MSA
122051465 5273 Angiosperm View MSA
121347945 5274 Embryophyte View MSA
123424446 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.8238 0.0 68.0774 High High
cufflinks 14.0747 0.0 42.4736   Low
cufflinks 18.7998 0.0 56.2683    
cufflinks 17.384 0.0 51.6511    
cufflinks 19.6912 0.0 58.3618    
cufflinks 20.7241 0.0 61.2051    
cufflinks 16.6619 0.0 50.0573    
cufflinks 20.7277 0.0 61.5059    
cufflinks 19.1024 0.0 56.784    
cufflinks 4.995       Low
cufflinks 10.474     High High
cufflinks 6.86        
cufflinks 7.82     High  
cufflinks 8.097     High  
cufflinks 6.516     High  
cufflinks 6.033        
cufflinks 7.231     High  
cufflinks 5.545        
cufflinks 5.614        
cufflinks 6.713        
cufflinks 9.798     High High
cufflinks 6.058        
cufflinks 5.407       Low
cufflinks 11.966     High High
cufflinks 6.166        
cufflinks 7.544     High  

0 Strain