Gene : Glyma.08G018800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31087:SF14 - PROTEIN LURP-ONE-RELATED 17 Genomic Order:  188
Name:  ? Glyma.08G018800 Secondary Identifier:  ? PAC:30535693
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G018800 0.5kb upstream 0.5kb upstream 2629 true Chr08: 1515199-1517827 Glycine max
Glyma.08G018800 0.5kb upstream 0.5kb upstream 500 false Chr08: 1517328-1517827 Glycine max
Glyma.08G018800 0.5kb downstream 0.5kb downstream 2629 true Chr08: 1514699-1517327 Glycine max
Glyma.08G018800 0.5kb downstream 0.5kb downstream 500 false Chr08: 1514699-1515198 Glycine max
Glyma.08G018800 1.0kb upstream 1.0kb upstream 3129 true Chr08: 1515199-1518327 Glycine max
Glyma.08G018800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 1517328-1518327 Glycine max
Glyma.08G018800 1.0kb downstream 1.0kb downstream 3129 true Chr08: 1514199-1517327 Glycine max
Glyma.08G018800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 1514199-1515198 Glycine max
Glyma.08G018800 2.0kb upstream 2.0kb upstream 4129 true Chr08: 1515199-1519327 Glycine max
Glyma.08G018800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 1517328-1519327 Glycine max
Glyma.08G018800 2.0kb downstream 2.0kb downstream 4129 true Chr08: 1513199-1517327 Glycine max
Glyma.08G018800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 1513199-1515198 Glycine max
Glyma.08G018800 5.0kb upstream 5.0kb upstream 7129 true Chr08: 1515199-1522327 Glycine max
Glyma.08G018800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 1517328-1522327 Glycine max
Glyma.08G018800 5.0kb downstream 5.0kb downstream 7129 true Chr08: 1510199-1517327 Glycine max
Glyma.08G018800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 1510199-1515198 Glycine max
Glyma.08G018800 10.0kb upstream 10.0kb upstream 12129 true Chr08: 1515199-1527327 Glycine max
Glyma.08G018800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 1517328-1527327 Glycine max
Glyma.08G018800 10.0kb downstream 10.0kb downstream 12129 true Chr08: 1505199-1517327 Glycine max
Glyma.08G018800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 1505199-1515198 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122240540 5265 Fabidae Singleton cluster - no MSA
124066391 5270 Rosid View MSA
123753181 5271 Pentapetalae View MSA
122791995 5272 Eudicot View MSA
122048433 5273 Angiosperm View MSA
121310971 5274 Embryophyte View MSA
123348336 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.602915 0.0 2.22166    
cufflinks 0.134422 0.0 0.52884 Low Low
cufflinks 0.236865 0.0 0.909326    
cufflinks 0.215007 0.0 0.829723    
cufflinks 0.581423 0.0 2.14633    
cufflinks 0.155539 0.0 0.608772 Low Low
cufflinks 0.932576 0.0 3.34993   High
cufflinks 0.548174 0.0 2.02847    
cufflinks 1.34531 0.0 4.6894   High
cufflinks 4.422        
cufflinks 5.251        
cufflinks 1.742        
cufflinks 0.086     Low Low
cufflinks 0.117       Low
cufflinks 21.876     High High
cufflinks 0.309        
cufflinks 11.802     High High
cufflinks 1.963        
cufflinks 0.171       Low
cufflinks 0.19        
cufflinks 11.29     High High
cufflinks 0.276        
cufflinks 1.21        
cufflinks 3.702        
cufflinks 0.127       Low
cufflinks 13.827     High High

0 Strain