Gene : Glyma.08G059300 G. max Wm82.a2.v1
Defline:  (1 of 2) PF00036//PF00070 - EF hand (EF-hand_1) // Pyridine nucleotide-disulphide oxidoreductase (Pyr_redox) Genomic Order:  593
Name:  ? Glyma.08G059300 Secondary Identifier:  ? PAC:30538285
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7279 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G059300 0.5kb upstream 0.5kb upstream 7234 true Chr08: 4529651-4536884 Glycine max
Glyma.08G059300 0.5kb upstream 0.5kb upstream 500 false Chr08: 4529651-4530150 Glycine max
Glyma.08G059300 0.5kb downstream 0.5kb downstream 7234 true Chr08: 4530151-4537384 Glycine max
Glyma.08G059300 0.5kb downstream 0.5kb downstream 500 false Chr08: 4536885-4537384 Glycine max
Glyma.08G059300 1.0kb upstream 1.0kb upstream 7734 true Chr08: 4529151-4536884 Glycine max
Glyma.08G059300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 4529151-4530150 Glycine max
Glyma.08G059300 1.0kb downstream 1.0kb downstream 7734 true Chr08: 4530151-4537884 Glycine max
Glyma.08G059300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 4536885-4537884 Glycine max
Glyma.08G059300 2.0kb upstream 2.0kb upstream 8734 true Chr08: 4528151-4536884 Glycine max
Glyma.08G059300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 4528151-4530150 Glycine max
Glyma.08G059300 2.0kb downstream 2.0kb downstream 8734 true Chr08: 4530151-4538884 Glycine max
Glyma.08G059300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 4536885-4538884 Glycine max
Glyma.08G059300 5.0kb upstream 5.0kb upstream 11734 true Chr08: 4525151-4536884 Glycine max
Glyma.08G059300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 4525151-4530150 Glycine max
Glyma.08G059300 5.0kb downstream 5.0kb downstream 11734 true Chr08: 4530151-4541884 Glycine max
Glyma.08G059300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 4536885-4541884 Glycine max
Glyma.08G059300 10.0kb upstream 10.0kb upstream 16734 true Chr08: 4520151-4536884 Glycine max
Glyma.08G059300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 4520151-4530150 Glycine max
Glyma.08G059300 10.0kb downstream 10.0kb downstream 16734 true Chr08: 4530151-4546884 Glycine max
Glyma.08G059300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 4536885-4546884 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313743 5265 Fabidae View MSA
124072571 5270 Rosid View MSA
123740807 5271 Pentapetalae View MSA
122787456 5272 Eudicot View MSA
122046891 5273 Angiosperm View MSA
121348097 5274 Embryophyte View MSA
123427504 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.34986 0.0 32.9193    
cufflinks 3.01637 0.0 11.7748   Low
cufflinks 5.03061 0.0 16.9888    
cufflinks 5.93629 0.0 19.6575    
cufflinks 21.6001 0.0 69.458 High High
cufflinks 15.523 0.0 49.5018   High
cufflinks 6.18768 0.0 23.9314    
cufflinks 7.27765 0.0 24.0673    
cufflinks 9.14181 0.0 28.9695    
cufflinks 2.451        
cufflinks 1.0        
cufflinks 0.976        
cufflinks 5.001       High
cufflinks 5.166       High
cufflinks 0.387       Low
cufflinks 0.642        
cufflinks 1.865        
cufflinks 2.037        
cufflinks 1.199        
cufflinks 0.351       Low
cufflinks 1.082        
cufflinks 0.616        
cufflinks 0.648        
cufflinks 1.171        
cufflinks 0.42       Low
cufflinks 1.998        

0 Strain