Gene : Glyma.08G061000 G. max Wm82.a2.v1
Defline:  (1 of 12) PF00954//PF01453//PF07714//PF08276//PF11883 - S-locus glycoprotein domain (S_locus_glycop) // D-mannose binding lectin (B_lectin) // Protein tyrosine kinase (Pkinase_Tyr) // PAN-like domain (PAN_2) // Domain of unknown function (DUF3403) (DUF3403) Genomic Order:  610
Name:  ? Glyma.08G061000 Secondary Identifier:  ? PAC:30536425
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G061000 0.5kb upstream 0.5kb upstream 4767 true Chr08: 4694260-4699026 Glycine max
Glyma.08G061000 0.5kb upstream 0.5kb upstream 500 false Chr08: 4698527-4699026 Glycine max
Glyma.08G061000 0.5kb downstream 0.5kb downstream 4767 true Chr08: 4693760-4698526 Glycine max
Glyma.08G061000 0.5kb downstream 0.5kb downstream 500 false Chr08: 4693760-4694259 Glycine max
Glyma.08G061000 1.0kb upstream 1.0kb upstream 5267 true Chr08: 4694260-4699526 Glycine max
Glyma.08G061000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 4698527-4699526 Glycine max
Glyma.08G061000 1.0kb downstream 1.0kb downstream 5267 true Chr08: 4693260-4698526 Glycine max
Glyma.08G061000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 4693260-4694259 Glycine max
Glyma.08G061000 2.0kb upstream 2.0kb upstream 6267 true Chr08: 4694260-4700526 Glycine max
Glyma.08G061000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 4698527-4700526 Glycine max
Glyma.08G061000 2.0kb downstream 2.0kb downstream 6267 true Chr08: 4692260-4698526 Glycine max
Glyma.08G061000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 4692260-4694259 Glycine max
Glyma.08G061000 5.0kb upstream 5.0kb upstream 9267 true Chr08: 4694260-4703526 Glycine max
Glyma.08G061000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 4698527-4703526 Glycine max
Glyma.08G061000 5.0kb downstream 5.0kb downstream 9267 true Chr08: 4689260-4698526 Glycine max
Glyma.08G061000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 4689260-4694259 Glycine max
Glyma.08G061000 10.0kb upstream 10.0kb upstream 14267 true Chr08: 4694260-4708526 Glycine max
Glyma.08G061000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 4698527-4708526 Glycine max
Glyma.08G061000 10.0kb downstream 10.0kb downstream 14267 true Chr08: 4684260-4698526 Glycine max
Glyma.08G061000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 4684260-4694259 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304326 5265 Fabidae View MSA
124074937 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.29526 0.0 19.2787    
cufflinks 4.28646 0.0 13.8807    
cufflinks 38.9126 0.0 168.516 High High
cufflinks 2.84149 0.0 12.1029    
cufflinks 0.345586 0.0 1.58669   Low
cufflinks 1.70063 0.0 7.10897    
cufflinks 2.30578 0.0 8.76143    
cufflinks 1.11596 0.0 4.14214    
cufflinks 0.182101 0.0 0.920417 Low Low
cufflinks 0.423        
cufflinks 0.015     Low Low
cufflinks 18.384     High High
cufflinks 0.069     Low  
cufflinks 0.024     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 7.717     High  
cufflinks 0.025     Low Low
cufflinks 6.412        
cufflinks 1.883        
cufflinks 8.292     High  
cufflinks 0.006     Low Low
cufflinks 7.218     High  
cufflinks 5.469        
cufflinks 0.022     Low Low
cufflinks 8.54     High  
cufflinks 0.043     Low  

0 Strain